| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6113 |
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| Symbol | copB1 |
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| ID | 4036395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007971 |
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| Strand | - |
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| Start bp | 187836 |
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| End bp | 189323 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | Cu(II)/Cu(I) resistance outer membrane protein CopB |
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| Protein accession | YP_581922 |
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| Protein GI | 94152515 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.109399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.679723 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAGT ACACACGAAT TGCAGTCGCC GCCCTGCTCA CTGCAGGAAT GAGCGCCGCG
TGGGCACAGC ACTCGCATTC GCCCAACAGT TCAAACAACG ATGGTGCGCC GGCAAACGAA
GCAACGCCGG ATTCACGCCC CCAGAAGGCG ACAGCCCCAA CCGCGAAGAA GCAGGGCTCA
ACGCCGAGCG CAGGACAAGG CTCAATGCAG GGCATGGACC ACAGCAAGAT GCAGGGCATG
GACCAGGGCT CGATGCAGGG CATGGACCAC AGCAAGATGC AAGGCATGGA CCAGGGCTCA
ATGCAGGGCA TGGACCACAG CAAGATGCAA GGCATGGACC AGGGCTCGAT GCAGGGCATG
GACCACAGCA AGATGCAGGG CATGGACCAG GGCTCGATGC AGGGCATGGA CCAGGGCTCG
ATGCAGGGCA TGGACCACAG CAAGATGCAA GGCATGGACC AGGGCTCAAT GCAGGGCATG
GACCACAGCA AGATGCAAGG CATGGACCAG GGCTCGATGC AGGGCATGGA CCACAGCAAG
ATGCAGGGCA TGGACCAGGG CTCGATGCAG GGCATGGACC ACAGCAAGAT GCAAGGCATG
GACCAGGGCT CAATGCAGGG CATGGACCAC AGCAAGATGC AAGGCATGGA CCAGGGCTCA
ATGCAGGGCA TGGACCACAG CAAAATGCAA GGCATGGACC AGGGCTCAAT GCAGGGCATG
GATCATGGCG CCATGCAGAT GCAGGGTGGA AGCGCTCCGC CGGACGCCAG AGATCCAGAT
GCTTATTCCG ACGGCGCAAA GCTCGGCGTC GGCCAATACG CGATTGGCCC CAGCCGGTCG
CTGCATATGG CGGACGAACA TATCTTCGCG TCCGTTCTCG TTGATCGCCT TGAATGGACC
AAAGGCAACG AAAGCAATGC GGCATCCTAC GAAGCGCAGG CGTGGATTGG GAATGCGTTC
AACAAGTTCG TGATCAAGGC AGAAGGCGAG GTGGAAAAGG GCAAGGTTCC CGAAGCCCGC
ACCGAACTGT TGTGGGGACA CGCCATTGCC ACGTATTGGG ACACCCAACT GGGTGTCCGG
AACGACGCCG GCTATGGGCG CCCTGCACGC AACTGGCTTG CGTTCGGTGT GCAAGGGTTG
GCGCCTTACT GGTTCGAAGT CGAGGCAACC GGCTATGTCG GCACCGAGGG ACGAACCGCG
CTGCGCCTTT CCGGTGAGTA TGATTTGCTG CTGACCCAGA GGCTGATCTT GCAGCCCAGG
TTGGAAGCCA GCCTGTACGG CAAGAACGAC CCCGAAATCG GTATCGGCAG TGGCCTTTCC
AGCGGCGCTG TCGGAGTGCG ATTGCGCTAT GAATTTAGCC GGCAGTTTGC GCCGTACATC
GGTATCGAAC GCTCGCAAAG CTTTGGCAAT ACCGCAAACA TGGTCCGAGC CTCCGGCGGT
CGCAGCGGCG AGACGCGCTT CGTCGCGGGT ATTCGCATGT GGTTCTGA
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| Protein sequence | MYKYTRIAVA ALLTAGMSAA WAQHSHSPNS SNNDGAPANE ATPDSRPQKA TAPTAKKQGS
TPSAGQGSMQ GMDHSKMQGM DQGSMQGMDH SKMQGMDQGS MQGMDHSKMQ GMDQGSMQGM
DHSKMQGMDQ GSMQGMDQGS MQGMDHSKMQ GMDQGSMQGM DHSKMQGMDQ GSMQGMDHSK
MQGMDQGSMQ GMDHSKMQGM DQGSMQGMDH SKMQGMDQGS MQGMDHSKMQ GMDQGSMQGM
DHGAMQMQGG SAPPDARDPD AYSDGAKLGV GQYAIGPSRS LHMADEHIFA SVLVDRLEWT
KGNESNAASY EAQAWIGNAF NKFVIKAEGE VEKGKVPEAR TELLWGHAIA TYWDTQLGVR
NDAGYGRPAR NWLAFGVQGL APYWFEVEAT GYVGTEGRTA LRLSGEYDLL LTQRLILQPR
LEASLYGKND PEIGIGSGLS SGAVGVRLRY EFSRQFAPYI GIERSQSFGN TANMVRASGG
RSGETRFVAG IRMWF
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