Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5928 |
Symbol | |
ID | 4042792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 129506 |
End bp | 132574 |
Gene Length | 3069 bp |
Protein Length | 1022 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637981347 |
Product | putative membrane carboxypeptidase (Penicillin-binding) transmembrane protein |
Protein accession | YP_588056 |
Protein GI | 94314847 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAACG TGTCACGTCG TGGCTGGATT CTCGTCGGGA TGACGGTCGC CGCATGCGGC GGCACCTACA TCGTTGTGAG CCTCGTCGCG AATGAGGTTC GCACCTCGCA ATGGCAGGCT CGGTACATGA GCCGGCTGGG CCAGTCGTTG ACGTACTCCA TCGAGCCCGG CCCCAGCGAC AGCATCCGCT ATCCACACTC CGGCCCCTAC GACGAGCGAC TCGGCTACGA GCGCCTGGGT GAGTTTGGCG AGCGTCTGCT CAAGCAAGGT TACGTGACCA GTTCCCAGGC GCGCATGTCG CCCGACATGG TGCGACTGAT GGACAACGGC ATCTTTCCGC CCTATCGCGA GAAGAACCAG GCCGGTCTGC TAGTGCGCGA CTGCAACGCG TTGACGCTGG CATTCGCGCG CTACCCGCAG CGCCAATATG ACAACTTCGA GTCGATTCCG AAGGTGCTGA TCTCCTCGCT GCTCTATGTG GAGAACCAGA ACCTGCTCAA TCCCGAGTAT CCGATGATGA ATCCGGCGCT GGATTGGCGC CGGCTGTCGC GTGCGGTACT CGACCAGGGC ATCAAGTTCG CTGACCGGCA CCACGACACC CCCGGCGGCA GCACGCTGGC CACACAGATC GAGAAGTACC GGCATTCCCC GAAGGGAAAA ACGCAGTCGG TCTCCGAGAA GTTCCGGCAG ATGGCCTCCG CTTCACTGCG CGCCTACCAT GACGGACCCG ACACGCAGCG CGTGCGCGAG AACGTCGTGC TGGACTATCT GAATACCGTG CCGCTGTCGG CGCGAGTTGG CCACGGCGAG ATCAACGGTA TCGGCGACGC GCTTTACGTC TGGTACGGCG AAGATTTCAG CGAGTTCAAC GCCGCGCTGC AGCAGATGAA TCCGCGTGAC CCCACGCCAC GCGAAGCGCA GGCTTACAAG CGTGCGTTGT CACTGATCAT CTCGCAGCGG CGTCCGTCGT ATCACCTGCG GCGCGATGAC ACGAACCTCG ATGCGCTGAC AGGTAGCTAC CTGCGCCTGC TGGCTGCGAA CAACGTCATC ACGCCGGAGT TGAGAGACGC GGCGCTGGAG CAGTCGTTGG ACAAGGCCCC ACCGCCGCCA CGCCCGGACG CCGAGCCGTG GGTCACGCGC AAGGCCGTCA ACCAGGTCAG CAACGATGTC TCGCACATGA TCGGCATCAA CAGCCGCTAT GACCTGGACC GGCTGGACCT GACCGTCGAC AGCACCATCA ATCGCGAGGC ACAGCGCCTG GTTACCGATA CGCTGCTGCG GATGCGTGAC AAGGGCGTCG CGCACGAGAT GGGCCTGTAT GGCAAGAACC TGCTACGCGA AGGCGATGAC CCATCGCGTC TCGTGGCCAG CTTCACGCTG TTCGAGCGCG TTGGCAATGC GAGCGTGGTG CGCGTGCAGA CTGACAATGT TGACCAGCCG TTCGACATCA ACGCCGGGGC GCGGCTCAAT CTCGGGTCGA CCGCCAAGCT GCGCACGCTG GTGACGTATC TCGAGATCAT CAGCGAACTG CATGATCGCT ACGTGGACAT AAGCCGCGCC GAGCTGACCG CGCTCCAGGT GCCGCGCCAG GATGTGCTGA CACGCTGGGC GGTCGACTAC CTGATCGCCG CGAAATCCCC GGCTGACCGT CGGCTGGCCA CGATGCTCGA TGCCGCGATG GAGCGCAAGT ATTCGGGCAG CGCCGGAGAG GCGTTCTTTA CCGGCGGTGG CATGCAGAGC TTCTCGAACT TTGAGAAATG GGAAGGCGAG CACCAGATGA CAGTGCGCGT GGGTTTCCAG CATTCGGTCA ACCTGGTGTT CGTGCGGATG ATGCGGGACA TCGTGCGTTA TGAGGTTTAC CAGGCGCACC CTGACGCACG TGATTTGCTC GAGGACCGCT ACGCGCCCGG CCGTCGCGCT TATCTCGAGC AGTTTGCCGA CGAAGAAGGT ACGGCGTTCA TGACCGCGTT CTACCAGCGT TATCGCGGCA AGGACAACGA CGAGCGGCTC AAGGTGCTGC TCGGCCGGGT CAAGCAGCCG ACGCCGCATC TGGCGGCCGT GCGGCTGTCC GTCACGTTAC TGAGCGCGCG GCCAAACACC GATTTCGAGA CATACGCGCG CACGCTGCGC CAGTGGATGC CGAAGCAGAA GGAGACGCTG TCGGACGAGG ACCTGCAGGC GCTGTATGTG AAGTACGGCC ACGACAAGTT CAACCTCAAC GATCGGGGCT ACCTGTCGCG CATCCACCCG CTGGAACTGT GGATGGTCGA GTATTTGGGC ACGCATCCGG ATGCGACGCT GAAGGAGATC CTGAAGGCGA GCGCGCCCGA TCGCCAGACT GTCTATGCAT GGTTGTTCAA GACGCGCAGC AAGCTCGGTC AGGATGGCCG CATTCGCACG CTGCTGGAAC GCGAGGCCTT TGGGAAGATC GCCACGCGCT GGCAACGGCT GGGCTATCCG TTCGATTCGC TCACGCCGTC CTACGGCACG GCGATCGGCG CATCGGGTGA CCGGCCTGCC GCGCTGGCCG AACTGGCGGG GATCATCCTG GCCAACGGGG TGGACGCCCA GCCCTCGGCG GTGCGCGCGC TGGCCTTCGC GTCGGACACG CCCTACGCAA GCGCCTACCG GCTGCAACCG GCGCCCGGCA AGCCGCTGAT CGTGCCGGAG ATCGCCATGC TGGTGCGGCG ATCCATGCTC GATGTCGTGC AGAACGGCAC CGCCAAGTCC ATCAGCGGTG CGTTCGTGCC ATTGAATCGG AAGGGGCAGG CGGTGGGGGC GCCATTGATC ATTGCCGGCA AGACCGGCAC CGGCGACCAA CGCTTCCAGA CCTATGGCCC GGGTGGCCGC GTGATCTCGT CGCGCTCGGT CAGCCGCTCG GCGACGTTCG TGTTCCTGCT CGGTGATCGC TATTTCGGCA CCGTGACGAT TCACGTGCGG GAGCCCTACG CCGCGCGTTA CTCGTTCACC AGCGCATTGT CATTGCGGGT GCTGCGCTCG CTGGCGCCGC AGATCACGGC GATGGTCGCG CCCGGCAGCG ACGCGACACT GCTCCGCTGC GAGAACTGA
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Protein sequence | MRNVSRRGWI LVGMTVAACG GTYIVVSLVA NEVRTSQWQA RYMSRLGQSL TYSIEPGPSD SIRYPHSGPY DERLGYERLG EFGERLLKQG YVTSSQARMS PDMVRLMDNG IFPPYREKNQ AGLLVRDCNA LTLAFARYPQ RQYDNFESIP KVLISSLLYV ENQNLLNPEY PMMNPALDWR RLSRAVLDQG IKFADRHHDT PGGSTLATQI EKYRHSPKGK TQSVSEKFRQ MASASLRAYH DGPDTQRVRE NVVLDYLNTV PLSARVGHGE INGIGDALYV WYGEDFSEFN AALQQMNPRD PTPREAQAYK RALSLIISQR RPSYHLRRDD TNLDALTGSY LRLLAANNVI TPELRDAALE QSLDKAPPPP RPDAEPWVTR KAVNQVSNDV SHMIGINSRY DLDRLDLTVD STINREAQRL VTDTLLRMRD KGVAHEMGLY GKNLLREGDD PSRLVASFTL FERVGNASVV RVQTDNVDQP FDINAGARLN LGSTAKLRTL VTYLEIISEL HDRYVDISRA ELTALQVPRQ DVLTRWAVDY LIAAKSPADR RLATMLDAAM ERKYSGSAGE AFFTGGGMQS FSNFEKWEGE HQMTVRVGFQ HSVNLVFVRM MRDIVRYEVY QAHPDARDLL EDRYAPGRRA YLEQFADEEG TAFMTAFYQR YRGKDNDERL KVLLGRVKQP TPHLAAVRLS VTLLSARPNT DFETYARTLR QWMPKQKETL SDEDLQALYV KYGHDKFNLN DRGYLSRIHP LELWMVEYLG THPDATLKEI LKASAPDRQT VYAWLFKTRS KLGQDGRIRT LLEREAFGKI ATRWQRLGYP FDSLTPSYGT AIGASGDRPA ALAELAGIIL ANGVDAQPSA VRALAFASDT PYASAYRLQP APGKPLIVPE IAMLVRRSML DVVQNGTAKS ISGAFVPLNR KGQAVGAPLI IAGKTGTGDQ RFQTYGPGGR VISSRSVSRS ATFVFLLGDR YFGTVTIHVR EPYAARYSFT SALSLRVLRS LAPQITAMVA PGSDATLLRC EN
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