Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5905 |
Symbol | |
ID | 4042769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 105084 |
End bp | 106037 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637981324 |
Product | LysR family transcriptional regulator |
Protein accession | YP_588033 |
Protein GI | 94314824 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.572512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.559463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTCA ACGCCCTGCG CCTGTTCGTC GATATCGTCG ACGCTGGCAA TCTCAGCGCC GCCGCGCGCA AGCTCAAGAT GACGCGCGCC AACGTCAGCT ACCACCTCAA GGCTCTGGAG GAGGAACTCG GCGTGCAACT GCTGCGCCGG ACGACCCGGC ACGTGGAACC GACGCCGGTG GGCGCCGGAC TGTACGAGCA CGGCAAAAAC ATCCTGGGCG AAGTGGCTGC GGCCAACGCG CTGATCAGCA GCATGGGCAA GAGCCTCCAG GGCCATGTGC GGCTGTCGGT ACCCACCGGT CTGGGTCACA CGATGATCTC GCCGCTGCTG GTGCGCTTCA AGCAGCGCTA TCCCGATATC ACGCTCGACG TCGTCTTTGA CAACCGCATC CACAACCTCG TCTCCGAGGA TGTGGAAGTG GCGTTGCGCA TCATCTCCAC GCCTCCCGAC TCGGTCGTTG CCACCGAAAT CGGCGGGGTG GACTGGCTGC TTTGCGCCGC GCCGTCGTAT CTGGCCGGAC GCACGCCGCC CGCGCACCTT GCCGACCTGA CGACCCATGC GATCGTGTGC GCGTCGCCGA TCGGGCAGAA ACTCAAGGTG TCAGGCACGC GCGACGGCAC CGCCGACCGC GAACAGGTGG TACTGGAGCC AACCCTGAGC TCCGAGAACT TCGCGTTCCT CAAGGAGGCC GTGGTCGGCG GGCTCGGCAT CGGCATTTTT CCGCTCTATG CGGTGGACAA GGAACTGGCC AGCGGCGCGC TGGAATCGCT GCTCGGCGAC TATCAGATCA GCGCGTTCGG CAGCAAGCTG TACATGCTGA CCATGCCCAA TCGCTACCAG ACCATGGCAA CGCGCTACCT GCTTACGTTC CTGAGAACAG AGCTGCAGGC GATCTGGCCG CGCATTCGTG CCGGCGGTGC CGACAGTGCC TATAGTGAGA ACACTCAGGA CTAA
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Protein sequence | MDLNALRLFV DIVDAGNLSA AARKLKMTRA NVSYHLKALE EELGVQLLRR TTRHVEPTPV GAGLYEHGKN ILGEVAAANA LISSMGKSLQ GHVRLSVPTG LGHTMISPLL VRFKQRYPDI TLDVVFDNRI HNLVSEDVEV ALRIISTPPD SVVATEIGGV DWLLCAAPSY LAGRTPPAHL ADLTTHAIVC ASPIGQKLKV SGTRDGTADR EQVVLEPTLS SENFAFLKEA VVGGLGIGIF PLYAVDKELA SGALESLLGD YQISAFGSKL YMLTMPNRYQ TMATRYLLTF LRTELQAIWP RIRAGGADSA YSENTQD
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