Gene Rmet_5901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5901 
Symbol 
ID4042765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp101090 
End bp102184 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content64% 
IMG OID637981320 
Producthypothetical protein 
Protein accessionYP_588029 
Protein GI94314820 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.596519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGT TGGACAACGA ATTGGACACC GAACAGACCG AAGACCGCGC CGGAACCGGC 
AGCACCGAAC AGCCTGACCA AACCCGGCCC CTGACTCCCG CCGCCTGGTT CAGCGTCAAG
ACCGTGTCGT ACGTGTTGAC CGCCGGGGCC CTGCTGCTGG TGATGCACGC CAACCTGGTG
TCCGCCCTGC TCGCCGGCCT GCTGCTCTAC TCTCTGGTGG ATGTGCTGGC GCCACGGCTG
ATGCGACTGC ATTCGCGCCG CGACGCCATC GCCGTGGCGA TCCTGTCCAC CATCATCCTG
CTGGTGCTGA CCGGCAGCAT CTGGGCGCTC ATCCGTTTTA TCAGCGGCGA CGGCAATACG
CTGGACCGGC TGCTCGACCA TTCCGCCGAC ATCATCGACC GCTCTCGCGC CCAGTTGCCA
GCCTGGCTGA GCGACTACCT GCCCAACGGG GTCGACGAAC TCGCCACGAC CCTGATCTCG
GCATTGCGCG AGCACGCGCA GATGGCGCAG CGGCTCGGCG CCGATATCCT GCGCACGCTG
GTCCATATCC TCGTCGGCCT CATCATCGGC GCGATGATCG CGCTGTACCG CGCCATTTCC
CGCCCGAATC GTCGCCCGCT AGCCCTGGCC CTGGTGGACC GGGCCCGCAC GCTGCAGACT
GCGTTCTCGC AGTTCATCTT CGCGCAGATC CAGATCTCGC TCGTCAACAC AATCCTGACC
GCGATCTACC TGCTGGTGCT GCTGCCCCTG TTCCACCAGC ACCTGCCGCT CTCCAAGACG
CTGGTGGCCA TCACGTTTAT CGCCGGACTG CTGCCGGTGC TGGGCAACCT GATCTCGAAT
ACGGCCATTG TCATCGCCTC GCTTTCGGTC TCGCTGCCGA TCGCGGTGGT GTCGCTGCTG
TTCCTGGTGT TGATCCACAA GCTCGAGTAC TTCCTCAACG CGCGAATCAT CGGCGCGCGT
ATACACGCCG CCGCATGGGA ACTGCTGACA GTGATGCTGG TGATGGAAAC GCTCTACGGC
ATCCCCGGCG TGATCGCGGG ACCGATCTTC TATGCCTACG TAAAGCGCGA ACTGAGCACG
GCCGGGCTTG TGTAG
 
Protein sequence
MPQLDNELDT EQTEDRAGTG STEQPDQTRP LTPAAWFSVK TVSYVLTAGA LLLVMHANLV 
SALLAGLLLY SLVDVLAPRL MRLHSRRDAI AVAILSTIIL LVLTGSIWAL IRFISGDGNT
LDRLLDHSAD IIDRSRAQLP AWLSDYLPNG VDELATTLIS ALREHAQMAQ RLGADILRTL
VHILVGLIIG AMIALYRAIS RPNRRPLALA LVDRARTLQT AFSQFIFAQI QISLVNTILT
AIYLLVLLPL FHQHLPLSKT LVAITFIAGL LPVLGNLISN TAIVIASLSV SLPIAVVSLL
FLVLIHKLEY FLNARIIGAR IHAAAWELLT VMLVMETLYG IPGVIAGPIF YAYVKRELST
AGLV