Gene Rmet_5898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5898 
Symbol 
ID4042762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp98690 
End bp99400 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content69% 
IMG OID637981317 
Producthypothetical protein 
Protein accessionYP_588026 
Protein GI94314817 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.81355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA TGAGCGCGCG CGAGCGCATG ATCGGGCGGC TGCGTGCCGC CGCGCCCGCT 
TCCGGTGCGA CGCTGAGCGG AGACACCCAG AAACTGGACC GGCGGATCGA CGACCATTTC
GATAGCCGCC GTGGTCAGGC ACCATCGATC GACGCGATGG TCGCCTCGAT GCAGGCCGCC
TTGACTGCCT CCCACGCCGA CGTGATCTGC ACCGACGCGG CAAGCTGGCC CGCATGGGTC
GCGCGGCGGC TGGCGGACGA AGGCGTGCGC CGACTGCTGC TCGACCGCGA TCGCCCCGAA
GGCGCCGCAC TTGCGCGGGC GCTGCCATCC AGCATCGACA CCGTAACGTT CGATCGTCCG
CTGGAAGCAT GGAAAGCGGA ACTGTTCGAT ACCGTCGATG CCGGCTTCAC CGTGGCCCGC
TCCGGGCTGG CCGCTACCGG CACGCTGGTG CTGGCGCCCG ATGCCGGATC GCCACGCACG
ATGTCGCTGG TGCCGCCCAC GCATATCGCA CTGGTCTACG CATCGGCGCT GCACCCCGAC
CTTCATGCCG CCGCGCGAGC CGAGCGCTGG TTGGACGGCA TGCCGACCAA TCTGGTGATG
GTCTCCGGCC CGTCCAAGAC CTCTGACATC CAGCAAACGC TGGCCTACGG CGCGCACGGC
CCACGCAGGC TGTGGGTCGT GATCGTGACC GACGGAGAAG CCGCGCGATG A
 
Protein sequence
MTTMSARERM IGRLRAAAPA SGATLSGDTQ KLDRRIDDHF DSRRGQAPSI DAMVASMQAA 
LTASHADVIC TDAASWPAWV ARRLADEGVR RLLLDRDRPE GAALARALPS SIDTVTFDRP
LEAWKAELFD TVDAGFTVAR SGLAATGTLV LAPDAGSPRT MSLVPPTHIA LVYASALHPD
LHAAARAERW LDGMPTNLVM VSGPSKTSDI QQTLAYGAHG PRRLWVVIVT DGEAAR