Gene Rmet_5604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5604 
Symbol 
ID4042468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2359364 
End bp2360806 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content66% 
IMG OID637981023 
Producthypothetical protein 
Protein accessionYP_587732 
Protein GI94314523 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGT CCGATTTCTT CGAGACCCTG TGGGCACGGA TGGCGCAACA GGGAGACTTC 
CCGACGCTTC AGTACTGTGT CGACAACATC TTCAAGACGC TCAACGCCGA CCTCACCGTC
GGCGAGATGG CCACAAGCGT GCTGTCGGAT TTCAGCCTGT CGCAGAAGGT GATCCGGCTC
GCCAACTCGG CCATGTACCG ATCGTTCGGC GGCGAGGTGA CCACCGTCTC GCGCGCGATC
CTGGTGCTGG GCGTGGAGGC GATCAGCCAC CTGACGCTCG GCATCCAGCT GCTCGACTAT
TTCCACGGCG TGGCGCCAAA TCGTCCGCAG GCCACGCGCG CGTTGCAACG CGCGCTGGTG
GCCGGCGAGA TCACGCGGGC GCTGAGCCAG GCACGCGGCA TCAACGAGGG CGAGGAAGCC
GTCGTCTGCA CGCTGATGCA CCATATGAGC CGGCTGCTCA TCGTGTTCTA TTTCCCCGAA
GAATGGGAAC GCGTGGAGGC CATGTGCGCC GCGCATCCAA TGACGGAAAA CGAGGCCTGC
CAGGAAGTGC TCGGTGTGTC GATGGTGGAA ATCGCCGAGG CGGCCGCGCG AAAATGGCGG
CTCCCGGGCC TGATCGCGCA CGCAATGAAG CCGCGCGCGC TGTCCACGGA TACCGTACTG
GAAACCCATG CCGACTGGCT CGCCGCGATT GCGCAGGTCT CCGCACAGGC CGCGGCCACG
ATGGTGCGCG ACGGCAATCA GGCATCGGTC GAGGCCTTGC TGCTGTCGCA CGCGAAGGTG
CTCGGCCTGG ACGCCAGCGA CGTCTCCGTG GCCGTGCGCC AGGCCGAGGT GCTCAATGCG
TCGATTGTCG AATCCGAATC GCCGGCGCAG GATGCCACAA CACTTGCCCA CGGCGCGCGC
CCGGATAACG TCCTGGAGCG ACTGCGGCAA GGCATCGCCG AGGTGCAGCG CGAAGGCGCG
GGCCGGACGG TATCGCAACT GGCACCGATG GTGCTGGAAT CGTCGATGCG CGCGCTGGAC
TTCTCGCGCT GTTTCCTGAT GATGCTGAAC CCCTCGACAC GGCACTTTCA CGCGCGGCTG
GGCTTCGGCG AGGGAATGCG TGAAAGGCTG TCCGCGCTGT CCTTCGAGGA AGGCTTCGTG
CCCGATGTGT TCCACTTTGC CGCGCTGGCG TCCAAGCCGC TGCTGGTGGA GGACACGACC
GACGCCGAAG TGGCGCGCCG TCTGCCACGG TGGTATCGCG ATGCGATTCC GGACGCGCGG
TCGATCCTGC TGGCGCCGGT GAGAATCCGC AATCGCTGCA TCGCCATGGT CTATGGTGAC
TGGGGCACCG CCCGCGCGCC CGCCGGTCTG GGCGAGGCCG AGCTCGAGAC CGTCGATGAG
CTGATGCGCG AAATCGCCGC AGGCGTGCTG CGCGCGGCGC CTGCGCAATC GCCCTCGCGC
TGA
 
Protein sequence
MSKSDFFETL WARMAQQGDF PTLQYCVDNI FKTLNADLTV GEMATSVLSD FSLSQKVIRL 
ANSAMYRSFG GEVTTVSRAI LVLGVEAISH LTLGIQLLDY FHGVAPNRPQ ATRALQRALV
AGEITRALSQ ARGINEGEEA VVCTLMHHMS RLLIVFYFPE EWERVEAMCA AHPMTENEAC
QEVLGVSMVE IAEAAARKWR LPGLIAHAMK PRALSTDTVL ETHADWLAAI AQVSAQAAAT
MVRDGNQASV EALLLSHAKV LGLDASDVSV AVRQAEVLNA SIVESESPAQ DATTLAHGAR
PDNVLERLRQ GIAEVQREGA GRTVSQLAPM VLESSMRALD FSRCFLMMLN PSTRHFHARL
GFGEGMRERL SALSFEEGFV PDVFHFAALA SKPLLVEDTT DAEVARRLPR WYRDAIPDAR
SILLAPVRIR NRCIAMVYGD WGTARAPAGL GEAELETVDE LMREIAAGVL RAAPAQSPSR