| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5561 |
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| Symbol | |
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| ID | 4042422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2311012 |
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| End bp | 2315052 |
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| Gene Length | 4041 bp |
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| Protein Length | 1346 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637980979 |
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| Product | transcriptional regulator (lambda repressor-like DNA-binding domain) |
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| Protein accession | YP_587689 |
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| Protein GI | 94314480 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGG GGGGGCTGGT CTCGGAACAA ATTAAGGCTG CTCGAGCACT ACTTGCATGG
TCTCAGCGCG AGTTGGCAGA AAAGGCGAGC GTTGTAGCCT CGGCAATTGC AGACTATGAG
CGCGGCTTCC GCCCCCTTTC TAATGGCGAC AACCAAGCCA TACAAGACAC ATTCAAGGCA
GCAGGTATTC AGTTTGCAAC CGACGCCGTC GCGGAATCAG CACAGCTGCC CGGGCTTAGC
CTTCATCGTC CCGGCGGGCT CATACGCTGG GTAGATTCCA CTCATCTTTC GCAATGGGCA
GAGCGCCGGG ACGGTCAGAG TGGGATGCCG GAACTAGTTC GACGCTTGAT TTTTGCGACC
GTTGGGCCAG CTGCCGAAGT TTGTTTCCCT GCTGGAGAGA GCGTCCAGTA TCCCGGCTGG
GATGGCCGGT GCAGAACCGT CGCTGGCTCT GGCTATGTTC CAAGAGGAAG CTCTGTGTGG
GAGATTGGAG CTCAGCGGAA CGCAGTTCGC TCAAAAGCCG ATTCTGATTT CGATAAGCGT
AGCGCTGATC CGCTTGGCTA CGACCCTGCA GACACGACGT TTGTTTTTGT GACGCCACAG
CGGTTCACTA GGAAGCTGGA GTGGATCGCA GAAAAAGCGG CACGCGGAGT GTGGCGAGAC
GTTATCGTTA TTGATTCCGA CGACCTCGTG CACTGGTTGG AGTTGTATCC GTCCGTGGCT
CAGTGGTTGT CGGTCAGTAT CGGATGCCGC CCGCAAGGGC TTCGAAACTT GGAAGAAGTC
TGGTCCGAGT GGATACGCGC AACCGAATTG CCACTGACCA CAGATGTCAT TCTGGCGGGG
CGTGATGATG ACCAGACGGT GGTCCATAAA TGGTTGAGGA ACTCTCCTGG ATTGCTTTCC
ATTCAAGCGG AGGCTCCGGA GGAGGCAGTG GCCTTTCTCT TTGCTGCTTT AAGTCCATTG
CCGGAACGCT ACCGGCTGTG GCATTTGGGT CGGTGCGTAG TCGCCGATAC CTCTGATTCG
GCCCGGCAGT TGATCGGCCT TGGTTCGCCA CTCATCGTCG CACTTATTGA AGCGGACGCT
GGTTTAGCGC GGCGCTTGGC TGACGATGGC CATCATGTCT TCATAGCATT TGGCCCCGCA
GCAAACGGCC ACGCAGGGAG CCTACGGCGA CTGCGCAGGC CGTGGAAGTC TGACTTGAAG
TCAGTTCTAA TGCGGGCGGG AATGGAGGAA ACAGACGCTC ATCGGTTTGC GCACGCGTCT
GGTAGAAGTA TTACGGTTCT TCGCCGCATG CTGCCAGTTG CACCACATAG CCAACCAGAG
TGGGCGAAGC GGGCAACTCC TGAGCTCGTC GCTGCAATGT TCGCGGGTGC TTGGGTAGGA
ACCTCGCCAC AGGATAGGCA GGTCATAAGC GAATTGGCCG GCCGTCCCTA TGAACAAGTC
GAAGAAGTGC TTGCTGCCTT AACAGCTTCG GTCGGTGGGC CACTCGTTAG GTCTGGAGAC
CTATGGAAGG TCGTTTCCCT TCGAGACCTT TGGATGCTGA TTGGCGGCCA GGTAAGTCCG
AGCCAGTTCG AGCGATTCGA AGAGACGTTT CAGACGGTTC TTAGTGCAGT CAATCCCCGA
TTCGCAACTA GACCAAAGAG CATCTACTAC GAAGCGGAGG GTGAATTCGA AGAGCAGCCT
TCCAGAGCGA TTCGCGGCGG CCTGACGGAA GCGATAATTG CAATTGCGTT GTTTCCAGAA
AAGGCAACTC TCATCCCCGC AATCGGGCAA AGTGTCGATC GCGCTGTACG TAAGCTCTTT
AATGATGCCG ACGCGGCACT ATGGTGGTCG CTCTCAAGCG ACTTCAGGAA TCTTGCCGAG
GCAGCCCCTG ACGCATTCCT AGATGCGATT GATAGAGGGC TGGAGGGTAC GGATCCGCCT
ATTGCATCCC TGTTTCGCTC GGACGAGGGA CTGTTTCACC CGAATGAATA TCTGTCGGAG
TTGCTCTGGG CACTTGAGAT GCTAGCGCGG AGTCGTGATT ATTTGGGTGC CGCTGCAACG
TTACTAGCTC GATTGCATGA AATAGACCCC GGGGGTAAAT GGAGCAATCG ACCGTTTGCA
TCGCTCCGGC GGATCTTTGT TACCTGGTTG CCACAAACGT ATGCCACAGC GTCAGAAAGG
CTCAAGGTAA TTGACCGCAT CGTGAGAACG AGTCCTGCTA TTGGCTGGCA ACTGCTACTT
GCCTTAGCCC CGCGTCCCCA CGACGTTTCT GAGCCATCAG CAAAACCTAA TTGGCGCGAC
TTTACTCCGG AGGAAAAGGA GGTGGTCACG CATGCGGCCG CAGCTACGGC TGCGAAAGCC
ATTGGTGAAC GGCTTCTCAC TCAAGCAGGG GACGACCCGG ACCGCTGGCT GACGCTGCTA
GCCTATTGGC CGAGATTTGA CAAGAGTTGG CGTGCTGCGG CGGTAGACCA GCTTACGAAT
GTAGTCCGCT GTATCCAGGC GCCAGCGGAT ATTGAAGCGA TTCGTGATGA GCTACGCGGC
GTGTTGGCAA AGAATCGCGC ATTTGCAGAG GCATCTTGGG CGATGGATGA GGCCACGCTA
GCGCCACTTG AGGTGATATT TGGCATGCTT CAGCCGACAG AGATCCAAGA GACAGTTCGT
TGGCTCTTTC GACCGGGGGC GGTAGAGTTG ACGCCTAACG TGGACTGGGG GCAGCAGCAA
GTAAGTTTGG AACTTGAGCA ACGCAAGGCT GCCGAAAGAT TGGTAGATGA ACTTTCGGCT
GATGAAATAT TCACGTTTGC ATCGTCGGTC ACGATGCATC GGCCACTTGG CGTGGCGATT
GCAGCGACAA GCAAGACCCA AGAGTCGAAG ATCACGCTCA TGAAGCACGG AATATCGGCC
GCTCACATGG TCGATATTGA GGTCGGGCTC GGAATTCTCT ATGGCCTGAA GGTGCAGGCT
GGATCCGAAG GAGACCGACT AGTTGGAAGC TTGTGGCAGC TGGCTATTGA AGAGGCTTGG
GGCGAGCAAG CAGAGCTTCA CTTGGTCCAA GCGCTTCCAG CTTGCATGTC GACGTGGGCA
GAGATTGATA GTCGCGGATC GTCGCTGAGC GAGAAATACT GGCGCACACT GCAAGTGTAC
TCAGTGGGAG GCGAGTTCGA AGTCGCGTAC TTCGCCGAGC AGCTGTTGAA AGCGGACCGA
GCAGTTGACG TTGTAGGTTG GATGGGTGGC CATATTCAAC TGAGGCCCGA TAGTCGGCTC
CTCATTTCCT CTTTGCACGC CGCAGCAAAT GCTAAGCAGC CGGTGGAGGG TAATGCGGCG
ACGATGTTTG CTCATCACGT TGGCGTCATC CTTGACTATC TGGCAGATAG TCCGAACGTC
AACGAGGAAG AAATTGCTGG CCTGGAGTGG GTGTATTACC AGGTGCTCCG GTACTCGCAG
CGCTCCCCGC GTAAATTACA TCGAGCGCTG ACACATAATC CCGCGTTCTT CGTCCACCTC
GTAAAGCTCA TCTGTGGTCC TGAAGAAGGT AGCGGCATTG TGGAGCCGGA GCCAACAAAC
CTGGAGCGTA TGCAGAGCTT GGCAGGCCAA GCGCTTGATG TGCTGCATGA CTGGGCTCAA
GTACCCGGGG CCGATGACCA AGGAAAGATT GACAGCAGAG TACTTGATTC CTGGGTAACG
CAAAGCAGAG TCCTTCTCGC CGAGTCGGGG CGGGCAAAGT ATGGCGAAAG TAGGATCGGC
GAGATACTCT CGGCTGCCAG GCCGGAGGGC ACCGATGCTT GGCCGCCGGC CGCTGTGAGA
GATGTTATTG AAGTAAATCG GAGTCGTGAA ATAGAACGAG GCTTCGAGAG AGGAGTCTAC
AATCGCCGTG GTGTAACAGT TCGGATGCCA CACGATGGAG GCATCTTGGA GCGGAACGCG
GCCATGAAGC TCCGACGTGA TGCCATAGCC CTGCGGTTTG AGTACCCCCG GACGGCCGCC
TGCTTGGAGC GTATAGCTGA AATGTACGAG TTCGACGCAA CTCGCCAAGA TATCAGCGCC
GAACAGCGAG ACTGGCTTTG A
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| Protein sequence | MSEGGLVSEQ IKAARALLAW SQRELAEKAS VVASAIADYE RGFRPLSNGD NQAIQDTFKA
AGIQFATDAV AESAQLPGLS LHRPGGLIRW VDSTHLSQWA ERRDGQSGMP ELVRRLIFAT
VGPAAEVCFP AGESVQYPGW DGRCRTVAGS GYVPRGSSVW EIGAQRNAVR SKADSDFDKR
SADPLGYDPA DTTFVFVTPQ RFTRKLEWIA EKAARGVWRD VIVIDSDDLV HWLELYPSVA
QWLSVSIGCR PQGLRNLEEV WSEWIRATEL PLTTDVILAG RDDDQTVVHK WLRNSPGLLS
IQAEAPEEAV AFLFAALSPL PERYRLWHLG RCVVADTSDS ARQLIGLGSP LIVALIEADA
GLARRLADDG HHVFIAFGPA ANGHAGSLRR LRRPWKSDLK SVLMRAGMEE TDAHRFAHAS
GRSITVLRRM LPVAPHSQPE WAKRATPELV AAMFAGAWVG TSPQDRQVIS ELAGRPYEQV
EEVLAALTAS VGGPLVRSGD LWKVVSLRDL WMLIGGQVSP SQFERFEETF QTVLSAVNPR
FATRPKSIYY EAEGEFEEQP SRAIRGGLTE AIIAIALFPE KATLIPAIGQ SVDRAVRKLF
NDADAALWWS LSSDFRNLAE AAPDAFLDAI DRGLEGTDPP IASLFRSDEG LFHPNEYLSE
LLWALEMLAR SRDYLGAAAT LLARLHEIDP GGKWSNRPFA SLRRIFVTWL PQTYATASER
LKVIDRIVRT SPAIGWQLLL ALAPRPHDVS EPSAKPNWRD FTPEEKEVVT HAAAATAAKA
IGERLLTQAG DDPDRWLTLL AYWPRFDKSW RAAAVDQLTN VVRCIQAPAD IEAIRDELRG
VLAKNRAFAE ASWAMDEATL APLEVIFGML QPTEIQETVR WLFRPGAVEL TPNVDWGQQQ
VSLELEQRKA AERLVDELSA DEIFTFASSV TMHRPLGVAI AATSKTQESK ITLMKHGISA
AHMVDIEVGL GILYGLKVQA GSEGDRLVGS LWQLAIEEAW GEQAELHLVQ ALPACMSTWA
EIDSRGSSLS EKYWRTLQVY SVGGEFEVAY FAEQLLKADR AVDVVGWMGG HIQLRPDSRL
LISSLHAAAN AKQPVEGNAA TMFAHHVGVI LDYLADSPNV NEEEIAGLEW VYYQVLRYSQ
RSPRKLHRAL THNPAFFVHL VKLICGPEEG SGIVEPEPTN LERMQSLAGQ ALDVLHDWAQ
VPGADDQGKI DSRVLDSWVT QSRVLLAESG RAKYGESRIG EILSAARPEG TDAWPPAAVR
DVIEVNRSRE IERGFERGVY NRRGVTVRMP HDGGILERNA AMKLRRDAIA LRFEYPRTAA
CLERIAEMYE FDATRQDISA EQRDWL
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