Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5550 |
Symbol | |
ID | 4042411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 2297523 |
End bp | 2298245 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637980968 |
Product | putative GntR family transcriptional regulator |
Protein accession | YP_587678 |
Protein GI | 94314469 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTACG CACAAGAAGC CACCGCTGAA CCGCGCGCCA GCGCCGGCAC GAACGTTATT GCCGGCATCC TGGCGTATTT GCAGGACCGG CGCCTGCAAC CAGGCGATCG CTTGCCATCT GAGCGCGACC TGGCCGAGCG ACTCGGTGTT GGCCGAAATG CTGTTCGTGA AGCGCTTGCG ACTCTTGTCA CACTTCGGGT GGTCGAGTCG CGCCCCAACT CCGGCGTCTA TCTGCGTCAC ATGTCCCGGG AAAGCAGCTT CGAAGCGCTC GTACTGCTGA CCGACATTGG CGCAACGCCC ACCCCGACTG AGGTGACGGA GACGATGGAG GTTCGTGCCC ATCTTGAGTT GCTCGCCGTC AGCCTGGCGT GCCAACGCCG CACCGACGAA GACCTCGCCC GGATGGAAGC GATCCTTGCC CGCACTGACC AAACGCTCGA GGCTGGCGGA AACATCGCCG AGATGGATAC GGATTTCCAT ATCGCCGTCG TCGACGCCGC ACACAACTCA GTGCTGGTTC GCACCCTCAA CGCCTTCTAT CGGTTTACCG CACGCCGACG AGAAGTACTG TTTGCTGACC ATACCCAAGG CCTCGCGTCG GCCCGCGAGC ATCGCCAAAT GCTGGAGCAC ATCAGCAACC GCGACATCTC AAAAGCTGAA CGCTTAATCC TCCAGCATAT GGATCGAGCA ACCACCTACT GGTCCAGCTA CCTGGAAACC TGA
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Protein sequence | MTYAQEATAE PRASAGTNVI AGILAYLQDR RLQPGDRLPS ERDLAERLGV GRNAVREALA TLVTLRVVES RPNSGVYLRH MSRESSFEAL VLLTDIGATP TPTEVTETME VRAHLELLAV SLACQRRTDE DLARMEAILA RTDQTLEAGG NIAEMDTDFH IAVVDAAHNS VLVRTLNAFY RFTARRREVL FADHTQGLAS AREHRQMLEH ISNRDISKAE RLILQHMDRA TTYWSSYLET
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