| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5527 |
|---|
| Symbol | |
|---|
| ID | 4042388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 2273154 |
|---|
| End bp | 2274089 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637980945 |
|---|
| Product | putative aminoglycoside phosphotransferase |
|---|
| Protein accession | YP_587655 |
|---|
| Protein GI | 94314446 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTGGCG AGATCGCTAA CCTTCGGCGC TTGTCCGGGG GAGCAACGAA GCAAACTTGG
GCATTCGAAT GGCGCTGCGG CAGCGCGGTC CAGCAACTGA TACTCCAGTT GACAGGGGCC
ACCATAGGGG CTGCAGGCAG GGCGCCGAAA CTTGAGGCTC GCGAAGACGC ATCGGTCATG
AAAGCGGCGC GGGCTGCAGG TGCTCCGGCG CCAGTGGTTC GGGTGATTCT TGAGCCAGAA
GATGGAATGG GCGCTGGCTA TGTGACCGAG TTTATTGAAG GAGAAACGCT CGGTCGTCGT
GTTGTCCTGG ACGAAGCTCT TTCGGGTGCA CGGTCTGTCT TGGCTCGGCA GTGCGGGGAG
GTCCTTGGAA AAATTCATCA AGTTCCAACG ACAGACCTTT CCTTTCTGAA GGTGCTTACG
CCTGAAGATG AGTTTGCAAC CTACAGAGAC CTCTTGAGCG AGTGCAATGT TCAGCATCCG
GCGCTTTCAT TCGCGATCCG CTGGATTGAA GAGCACCTGC CAGAGATGGA AACGGCCGGC
CTGGTTCATG CAGACTTCCG AACTGGTAAC TTGATCGTAG GGGAGCAGGG GTTGCGATGC
GTGCTGGACT GGGAAATCGC GCGTATCGGG GATCCGATGC AGGACTTGGG CGTTCTCTGT
ATGCGGAGTT GGCGCTTCGG CGGTCGAGGT GATGTTGGGG GATTCGGCGC GCGAGACGAT
CTATACGCTG GCTACGAAAG CGTGACTGGA CGGGTTGTCG ACAAGCAACG AGTGCATTTC
TGGGAGGCCT TCGCCAATTT GAAGTGGGCG ATAGCATGTG TGCGTCGCGG CTCGGCGCAG
GCTGCAGGTG GCAGCCAAGC AAGTCTGGAG TTGAGTGCCA TTGGTCGGCG AATGGAAGAG
CCGTTGTGGG ACTTCATGAA TCTGGTCAAG CCTTGA
|
|---|
| Protein sequence | MPGEIANLRR LSGGATKQTW AFEWRCGSAV QQLILQLTGA TIGAAGRAPK LEAREDASVM
KAARAAGAPA PVVRVILEPE DGMGAGYVTE FIEGETLGRR VVLDEALSGA RSVLARQCGE
VLGKIHQVPT TDLSFLKVLT PEDEFATYRD LLSECNVQHP ALSFAIRWIE EHLPEMETAG
LVHADFRTGN LIVGEQGLRC VLDWEIARIG DPMQDLGVLC MRSWRFGGRG DVGGFGARDD
LYAGYESVTG RVVDKQRVHF WEAFANLKWA IACVRRGSAQ AAGGSQASLE LSAIGRRMEE
PLWDFMNLVK P
|
|---|
| |