| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5419 |
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| Symbol | |
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| ID | 4042280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2165250 |
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| End bp | 2166431 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980837 |
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| Product | peptidase, M20D subfamily |
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| Protein accession | YP_587547 |
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| Protein GI | 94314338 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.880964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCA CACCCATTCC CGCCGCCATC TCGTCCGCAG CCAGCCGCTT TGCCGATCTG
CGCCATCGCA TCCATGCGCA CCCGGAGCTC GGGGCCGACG TGCCGCGCAC CGCCGCCATG
GTGGCCGGTC TGCTGCGCGA ATGGGGCTAC GACGTCCATA CCGGCATTGG CGGCCACGGC
ATCGTGGCCC AGCTCAATGT CGGCAACGGC CCGCGCCGCA TCGGCATTCG GGCCGACATG
GATGCGCTCC CGCTGCAGGA ACGCACCGGC TTGCCCTATG CCAGCGAAGT ACCCGGCCGT
ATGCACGCCT GCGGGCATGA CGGGCACACG GCCACGCTAC TGGCCGCTGC CGAATATCTC
GCGGCCACGC GCAACTTCGA TGGCACGCTG AACCTGATCT TCCAGCCTGA CGAGGAAGGC
ATGACCGGCG CCCTGTCGAT GATGGAGGAT GGTCTCTTCG AACGCTTTCC GTGCGACGCG
ATCTACGCGT TCCACAACGC GCCGGGCCTG CCGGTCGGCA TGGCCGTGGT CCAGTCTGGC
GCGCAGGGCG GATCGTCGGA CCGCGTGACC GTGACCTTCC GCGGCAAGGG CGGGCATGGC
GCGATTCCGA ATCGTGCCGC CGACCCCACG CTGGCGCTGG CGCACACCGT GGTGGCCCTG
CAAGGCATCA TCGCGCGCAA CGTGGCGCCG GTGGATGCGG GCGTGATCAG CGTGGGCCAG
ATCGAAGCGG GCACGACCTA CAACATCATC CCGGAGACTG CCACGCTCAA GCTCAGTGTG
CGTGCCACGT TGCCCGAGGT CCGCAAGCTG CTGGAGGAAC GCATCCGTGC CGTGGTCACG
CATCAGGCCG CGTCGGCCGG TGTCGAGGCC GAGATCGAGT ACCTGCATCT GGTGCCGGCC
ATCCGCAACA CGCCGGCAGA AGCGGCGATC GCGCGCGAAG CCGTCGCCAG CGTGCTCGGC
AATGACAACG TCATCCAGGT CCCGCCCTCG ACGCAGATGG GCAGCGAGGA CTTTGCCTGG
ATGCTCGAGA AGGTGCCCGG CTGCTATTTC GTGCTTGGCA ACGGCACTGG CGAGTGGGTA
GGTTGCTCGG TGCACAACGA CGGCTACGAC TTCAACGATG CGCTAATTCC GCTCGGCGCC
GCCTGCTGGG TAGCATTGGC AGAGGGCTAT CTCAAGTCGT GA
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| Protein sequence | MTTTPIPAAI SSAASRFADL RHRIHAHPEL GADVPRTAAM VAGLLREWGY DVHTGIGGHG
IVAQLNVGNG PRRIGIRADM DALPLQERTG LPYASEVPGR MHACGHDGHT ATLLAAAEYL
AATRNFDGTL NLIFQPDEEG MTGALSMMED GLFERFPCDA IYAFHNAPGL PVGMAVVQSG
AQGGSSDRVT VTFRGKGGHG AIPNRAADPT LALAHTVVAL QGIIARNVAP VDAGVISVGQ
IEAGTTYNII PETATLKLSV RATLPEVRKL LEERIRAVVT HQAASAGVEA EIEYLHLVPA
IRNTPAEAAI AREAVASVLG NDNVIQVPPS TQMGSEDFAW MLEKVPGCYF VLGNGTGEWV
GCSVHNDGYD FNDALIPLGA ACWVALAEGY LKS
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