| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5411 |
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| Symbol | |
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| ID | 4042272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2152358 |
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| End bp | 2154457 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980829 |
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| Product | putative membrane Zinc metallopeptidase, M50 family |
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| Protein accession | YP_587539 |
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| Protein GI | 94314330 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000871616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.282869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCCA GCCCCGACCA ACTGCCGCTG CCGCTGCTGC GAGAGGACTT GCGCCTGTTC
CCCGGCGCCC CGCATACCGA CGGCAGCCCG GCGTGGATCA TCGAAGACCC CGTACGCAAC
CGCCATTTCC GGATCGGCTG GCTCGAGTTC GAATGCCTGC AGCGCTGGCA CATGACGCCG
CGCGCCATCG CGGAGCAGGT GCGCGCCAGC ACGCCGCTCG AGGCGCAAAG CGAGCAGGTG
CTCGGCTTTG CCGCATTCCT GCAGGGCAAT GCGCTGCTGC GGCCATCGCC CGGACGCAGC
CAGGAGATGG CCACCACCCG CCAGCCACGT GAATGGCTGA GCTGGCGCTG GTGGCTGCAC
CACTACCTGT TTTTCCGCAT TCCGCTGTTG CGGCCGACCT ACCGCATCCA GTCGCTGTAC
CGGCATCTGC AGTGGCTGTT CCAGCCGGCC ACGGCATGGA TCGTACTGGG GCTCACATTG
CTGGGGGTCG TGCTGACCTT GCGGCAATGG GACACCTTCC GGCATACGCT GTTCGAATCG
ATCTCGCTGG AAGGCGCGGT GGGCTTCGCA TGCGCCGTGG TCGTTGCCAA GACGCTGCAT
GAACTCGGTC ATGCGCTGGT CGCGACCCAC TTCGGTGTCA GAGTGGGACA CATGGGCGTG
GCGTTTCTCG TGATGTGGCC CATGCTCTAT ACGGACACCA GCGAGTCCTG GCGGCTGACC
AACGCGCGGC AGCGGCTGGC CATTGCCAGC GCGGGCATCG TCACCGAACT GATCATTGGC
GGTCTGGCCA CGCTGGGCTG GGCGCTGCTG GCGCCCGGCC CATTGCGCCA GGCGTGCTTC
TACCTGGCCA CCACCAGCTG GGTGCTGTCG CTGGCGCTCA ATGCCAGCCC GTTCATGCGT
TTCGATGGCT ACTTCATTCT GTCCGATCTG CTCGACCTGC CGAACCTGCA CGAGCGGGCG
GGCGCGCTGG CGCGCACGGC GCTGCGGCGT CTGCTGCTGG GCTGGCCAGA CCCGTGGCCA
GAGCCGCTGC CCGCGACGCT TCGCAACCGG CTGATCGCCT TTGCCTGGGT CACGTGGTGC
TACCGGCTGA CCGTATTCCT CGGCATCGCA CTGGTGGTCT ATCACCTCTT CTTCAAGGCG
TTGGGCGTTG CGCTCTTTCT GGTCGAAATC GTGTTCTTTA TCGCGCTGCC GTGCTGGCGG
GAGCTCCGCG TGTGGTTCCG GCGGCGGGCG GAGACCACGC GCCCGCGCCG CCGGTTGCTG
TGGGGCGCGC TGGCCGCGCT GCTGATCGTG CTGGCGATTC CCTGGCCAAC CGGCTTGCGG
GCGCCGGCGC TCGCGCACAG CGCGCGCCAA TGGACCGCAT ACGCACCGGC GCCAGCGCAA
CTGGTATCCA CCACGCCCCC GGGCCACGTG CGCGCCGGCA GTGCCCTGAT CCAATTGCGT
CAGCCGGAAC TTGTGAGCGA GGCAATGGCG GCGCAGGCCA GCATCAATGG CAACGATGCG
CGGCTGACGG GCCTGCTCGA ACTGCGCCGT GGTATCGAGC AACAAGCCGC CACGCTCGAA
GAACTGCAGC AGAGTCTGGC GCGCGCGCGC GCCGTCCACG CGGAAGAACG CCGACTGCTG
CTTGCGGCGC CGTTCGATGG CGCATGGGTG GACGTACCGG ATGACATTCG CGCCGATACC
TGGGTGGGCT CCAAACAGGT ACTGGGCCGG CTGATCGACC CGGCGCACTG GATGGTGGAT
GCCTTCGTCG ACGAAAGCGA TGTGCAGTAT CTGCGCATTG GGGCCCGCGC CTGCTTTTTC
CCCGATGCGC GTCCGGCTCG CCACTGCGGC GTGATACGGG CCATCGCGCC GTCGCGCAGC
GCGCAGATTC CGGCGGCGCA ACTCACCACA CCCCACGGCG GGCCCATCGC CGCCGTCGAC
AAGCAAGGCG CGCTGATTCC GGACGCCGCA CTCTATCTCG TCCAGATCGA CCTGGCCGCG
CCGCCGCCAT CACTGGTCGA GCTGCGCGGC AACGTTCTTC TGGCCGGCGA GCCTCGCAGC
CGACTGGCGG ACTGGATGCG TAACATCTAC AGCGTCGTGA TTCGCGAGAG TGGGTTCTAG
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| Protein sequence | MQASPDQLPL PLLREDLRLF PGAPHTDGSP AWIIEDPVRN RHFRIGWLEF ECLQRWHMTP
RAIAEQVRAS TPLEAQSEQV LGFAAFLQGN ALLRPSPGRS QEMATTRQPR EWLSWRWWLH
HYLFFRIPLL RPTYRIQSLY RHLQWLFQPA TAWIVLGLTL LGVVLTLRQW DTFRHTLFES
ISLEGAVGFA CAVVVAKTLH ELGHALVATH FGVRVGHMGV AFLVMWPMLY TDTSESWRLT
NARQRLAIAS AGIVTELIIG GLATLGWALL APGPLRQACF YLATTSWVLS LALNASPFMR
FDGYFILSDL LDLPNLHERA GALARTALRR LLLGWPDPWP EPLPATLRNR LIAFAWVTWC
YRLTVFLGIA LVVYHLFFKA LGVALFLVEI VFFIALPCWR ELRVWFRRRA ETTRPRRRLL
WGALAALLIV LAIPWPTGLR APALAHSARQ WTAYAPAPAQ LVSTTPPGHV RAGSALIQLR
QPELVSEAMA AQASINGNDA RLTGLLELRR GIEQQAATLE ELQQSLARAR AVHAEERRLL
LAAPFDGAWV DVPDDIRADT WVGSKQVLGR LIDPAHWMVD AFVDESDVQY LRIGARACFF
PDARPARHCG VIRAIAPSRS AQIPAAQLTT PHGGPIAAVD KQGALIPDAA LYLVQIDLAA
PPPSLVELRG NVLLAGEPRS RLADWMRNIY SVVIRESGF
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