Gene Rmet_5348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5348 
Symbol 
ID4042209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2066852 
End bp2067847 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content68% 
IMG OID637980766 
Producthypothetical protein 
Protein accessionYP_587476 
Protein GI94314267 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.57762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTTT CGCAGTCTGC GCATTCCGCG CCGAGCCCTT GTTCCATGGG GGTTCCCGGC 
CGTGCGCGTA GGTGGCACGG AATTTGTAAT GATTGGCGCC TTACAAAAAT TCTTACGCTC
GCCCCCCCAG CGTTTGTCCT GATGGAATCG ATCTATGCCG TGGGCGCCTC TCTGGGCGCC
ATCGTGGGCC TGATCCTGGC GCTGACCGGC GCTGGCGGCG CCATTCTTGC CGTGCCACTG
CTGGTATTCG GCCTGCATCT ACGCATGGCT GAAGCCGGCC CGATCGCGCT GCTGGCGGTT
GGCGTGTCGG CTGCGGTTGG CGCGTTAATC GGGCTCCGCG CGGGTATCGT GCGCTATCGG
GCTGCCGCCA TGATGGCGGC AAGCGGCGTG CTGGCCTCGC CCGTCGGGCT ATGGCTCGCG
CACCGGGTGC CGAACGGCCC GCTGACCGTG TTGTTCGCGA TCGTGCTGGG CTGGGTGGCC
GTGCGCATGT TCAGGCAGAG CCGCGCGCCG CAACCAGTGG CCTCGGCGGC CGCGGCGGCC
ACTGCGGCCT CAACCGCCAT GCTGCCGCAG GGACCGCTAC CACCCTGCCA ACTCGATGAC
GCGACAGGTC GCTTCGTCTG GACGGCGTCT TGCACGCGCG CGCTGGCGGC GTCGGGTATC
GGCGCGGGCT TTCTCTCCGG TCTGCTGGGC GTAGGTGGCG GTTTCGTGAT CGTTCCCGCG
CTGCGCCGTG CGACCAATGC GCCGGTCAAG ACGATCGTGG CCACGTCGCT GGCCGTGATC
ACGCTGGTGT CCGCTTCGGG CGTGGTGTCC ACCGCGCTGG CCGGCAATAT GAACTGGCAT
GTCGCCGCGC CGTTCGCGGC GGGCGCGATG CTCGGGATGC TCGTCGGCAG GCTCTTCGCC
AGCCGCCTGA GTGGTCAGCG GCTGCAGCAG GGCTTTGCTG TGGTCGCCGG ACTGATCGCC
ATCGGCATGG TGGTCAAGGT CGTGCTTGCA GTCTGA
 
Protein sequence
MPLSQSAHSA PSPCSMGVPG RARRWHGICN DWRLTKILTL APPAFVLMES IYAVGASLGA 
IVGLILALTG AGGAILAVPL LVFGLHLRMA EAGPIALLAV GVSAAVGALI GLRAGIVRYR
AAAMMAASGV LASPVGLWLA HRVPNGPLTV LFAIVLGWVA VRMFRQSRAP QPVASAAAAA
TAASTAMLPQ GPLPPCQLDD ATGRFVWTAS CTRALAASGI GAGFLSGLLG VGGGFVIVPA
LRRATNAPVK TIVATSLAVI TLVSASGVVS TALAGNMNWH VAAPFAAGAM LGMLVGRLFA
SRLSGQRLQQ GFAVVAGLIA IGMVVKVVLA V