| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5319 |
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| Symbol | zniA |
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| ID | 4042180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2025492 |
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| End bp | 2028629 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980737 |
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| Product | heavy metal cation tricomponent efflux efflux pump ZniA |
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| Protein accession | YP_587447 |
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| Protein GI | 94314238 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.358374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.430552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCAGGA ACGTACTTCG GTTGTCGCTG ACGCGACGGC CGCTCATTCT GCTTTTCCTC
CTGGTATTTG CCGGGGCCGG CTTGTTCGCC TACTCGAAGC TGAACATCGA AGCCTATCCG
AACCCCGCAC CGGTGATTCT CGAGATCACC GCGCAGGCGC CGGGCTTGTC CGCCGAGGAG
ATGGAGCGCT ACTACACGGT GCCCATGGAA GTGGGGCTGG CCGCCACGCC GGGCGTGGAA
AGCATCCGCT CGACCTCGTT TTACGGCCTG TCGTTCGTGC GGGTGACGTT CAAGTACGGC
GTCGACTACT ACTTCGCCTA TACGCAGGCC GCGCTCAACC TGCAGCAGAA CGTCAGCCTG
CCGAACAACG TGCAGCCGCA GATCCAGGCG TCGAGCCTGG TCGGTGAAAT CTACCGCTAC
CAGCTCAGGG GGCCGGCGCA CTTCGGGCTG ACAAACCTGC GCACGCTGCA GGACTGGGTG
CTCGAACGGC GACTGAAGAC GGTGCCGGGC GTGGCGCAGG TGGTGAGCTG GGGTGGCACG
ACTAAGGAGT ACGACGTCGA GGCCGACCTG CACAAGCTCG ACGCGTACAA CATTACGCTG
CAGCAGATGA TCTCCGCGCT GGGTAACGCC AACATCAACG TTGGCGGCCG GACCATCAAC
CTTGGACAGC AGTCGGTCAA CATACGTGGC GTAGGCCTGA TCGAGGACAC CAAGGACATC
GAGCAGGTGG TACTGACACA GCACAATGGC GTGCCCGTGC AGGTCAAGGA CGTCGCCAAG
GTCAAGATCG GCTACACGCC ACGCCTGGGT CGCTCCGGGC GCGACAACCA GGACGACGTG
GTCACTGCCA TCGTCGTGAT GAACCGGACG CTGCAAACCA ACGAGGTGGT GGCGCGCGTC
AAGGCCGAGA TCGACAAGAT CAACAGCGAT GGCACGCTGC CTGCCGGCGT GAAGATGGAG
CCGTACTATG ACCGTTCGAC GCTGGTCTCG GTCACCACGC ACACGGTGCT GCACAGCCTG
CTGTTCGGCT GTCTGCTGGT GTTCTTCATC CAGTGGGTAT TCCTGGGTGA TCTGCGCAGC
GCGGTGATCG TTAGCGTCAA CATACCGTTC GCGCTCTTCT TCAGCATCAT GATCCTGGTG
ATGCTGGGAG AATCCGCCAA CCTCTTGTCG GTGGGGGCGG TCGACTTCGG GATCATCGTG
GACTCCTCGG TGATTCTGGT GGAGAACATA TTCCGGAACT TCCAGATGCC GCTGGCGGAT
CAGCAGCGGC TGCTGATGAG TCGGGACGCG CGGGCGATCG GCAAGGGCGC GGGTATCACG
GACCGCATCC GCATGATCTT CGTGAGCGCG CTGCAGGTGG ACAAGGCGGT GTTTTTCTCG
GCGGCCATCA CGGTGGCGGC GTTCGTCCCG CTGTTCACGA TGCAGGGTGT GGAAGGGCAG
ATCTTCGGGC CGATGGCGCG TACCTATGGC TATGCGCTGC TGGGCGCGCT GATCGCCACG
TTCACGGTGA CGCCGGTGCT GTGCACCTAT CTGCTGCCCA AGCACATCGA GGAGAAGGAA
ACCATCTTGG TGCGCTGGCT GCATCGTATC TATGAGCCCG CGCTCAAATG GTCGCTTGGC
AACAAGAAGC TGTCGGTGGC GATTGGCGCC GGCGTGCTGG CGGTGACGGG GGCGTTGATG
CCGCTGCTGG GCACCGAGTT CCTGCCGGCG TTGGAAGAGG GCAACCTCTG GATTCGCGCC
ACCATGCCGC CAACCGTTTC GCTGGAGGCC GGCGTGCCGT CAGTGGCGCG AATGCGCAAG
ATCCTGCTGT CGCATCCTGA AGTGGCGACG GTGGTGTCCC AGCATGGCCG TCCAGACGAT
GGCAGCGATG CGGCGGGCTT CTTCAACGCG GAGTTCTTCG TACCGCTCAA GCCGATGGAT
GAATGGCCGG CGGGCATGAC CAAGGACAAG CTGGTCGCGC AGGTGCAGAA GGAGTTCGCC
AACGAGTTCA CAGGGATCTC GCTGAATTTC TCGCAGTACA TCCAGGACAA TGTCCAGGAA
GGCCTTTCCG GCGTGAAGGG CGCGAACTCG GTGAAGATCG TCGGCCGCGA CCTGCCCACG
CTCGAGAAGC TGGCCGACCA GGTGCTGCAC GAGATGAAGG AGATCCGGGG CGTGTCGGAC
CTTGGCGTGT TCCGCGTGCT GGGTCAGCCC AACCTGAACA TCAAGATCAA CCGCGAGGCG
GCGGCGCGTT ACGGGCTTAA CACCGGCGAT GTCAACTCGG TGGTGGAGGC CGCGCTGGGT
GGCACGCAGG CGACGACCGT GCTCGAAGGC GACCGGCAGT TCTCGCTGAC GGTGCGTATG
GCGCCCGAGT ATCGCGGCAG TATCGACGCG ATCCGCAACA TCAAGGTGGC GTACCAGACA
GCGGATGGCG CGAATGCCTA TATTCCGTTG AGCGCGTTGG CGGACATATC ACTGGATACC
GGGGCGTCGT ACATCTATCA CGAGCGCAAC CAGCGATACA TCCCGATCAA GTTCAGCGTG
CGTGACCGCG ACCTGGGCAG CACGGTGGCG GAAGCGCAGG CGCGTATCGC CAGCAAGATC
AAGCTACCCG AGGGCTACCG CATCCAGTGG GCGGGCGAGT TCGAGCAACT GGAACTGGCG
AAGAAGCGGC TTGCGCTGAT CGTGCCGATC AGCATCGTGA TGATCATGGT GCTGCTGTAC
GGTCTGTTCA ACTCGCTGCG GGACAGCGTC ATGACGCTCG CGGGCATTCC GTTCGCCATC
GCCGGGGGCG TGATCGCGCT GTTCGTGACC GGTCTGGATT TCAGTATCTC GGCGGCGATT
GGCTTCGTCT CGTTGTTCGG GGTATCGGTC ATGGACGGCA TCCTGATGAT CACCTACTAC
AACCAGTTGC GTGAACAGGG GCTGAAGTCC GAAGCGGCGA TGTCGCAGGC GGCCCAGCAG
CGGATGCGCC CGATGCTGAT GACGGCGCTT TCGGCCTGTA TCGGTTTGCT GCCGGCGGCC
ATCTCCACCG GGATCGGCAG CCAGGTGCAG CGTCCGCTGG CCACCGTGGT GGTGGGTGGC
ATGTTGATCG GACCGATCAT GCTGCTGGTG ATCGTGCCGG CGCTACGCAT GGTGTTCATC
GGCAAGAAGG AGACCTGA
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| Protein sequence | MLRNVLRLSL TRRPLILLFL LVFAGAGLFA YSKLNIEAYP NPAPVILEIT AQAPGLSAEE
MERYYTVPME VGLAATPGVE SIRSTSFYGL SFVRVTFKYG VDYYFAYTQA ALNLQQNVSL
PNNVQPQIQA SSLVGEIYRY QLRGPAHFGL TNLRTLQDWV LERRLKTVPG VAQVVSWGGT
TKEYDVEADL HKLDAYNITL QQMISALGNA NINVGGRTIN LGQQSVNIRG VGLIEDTKDI
EQVVLTQHNG VPVQVKDVAK VKIGYTPRLG RSGRDNQDDV VTAIVVMNRT LQTNEVVARV
KAEIDKINSD GTLPAGVKME PYYDRSTLVS VTTHTVLHSL LFGCLLVFFI QWVFLGDLRS
AVIVSVNIPF ALFFSIMILV MLGESANLLS VGAVDFGIIV DSSVILVENI FRNFQMPLAD
QQRLLMSRDA RAIGKGAGIT DRIRMIFVSA LQVDKAVFFS AAITVAAFVP LFTMQGVEGQ
IFGPMARTYG YALLGALIAT FTVTPVLCTY LLPKHIEEKE TILVRWLHRI YEPALKWSLG
NKKLSVAIGA GVLAVTGALM PLLGTEFLPA LEEGNLWIRA TMPPTVSLEA GVPSVARMRK
ILLSHPEVAT VVSQHGRPDD GSDAAGFFNA EFFVPLKPMD EWPAGMTKDK LVAQVQKEFA
NEFTGISLNF SQYIQDNVQE GLSGVKGANS VKIVGRDLPT LEKLADQVLH EMKEIRGVSD
LGVFRVLGQP NLNIKINREA AARYGLNTGD VNSVVEAALG GTQATTVLEG DRQFSLTVRM
APEYRGSIDA IRNIKVAYQT ADGANAYIPL SALADISLDT GASYIYHERN QRYIPIKFSV
RDRDLGSTVA EAQARIASKI KLPEGYRIQW AGEFEQLELA KKRLALIVPI SIVMIMVLLY
GLFNSLRDSV MTLAGIPFAI AGGVIALFVT GLDFSISAAI GFVSLFGVSV MDGILMITYY
NQLREQGLKS EAAMSQAAQQ RMRPMLMTAL SACIGLLPAA ISTGIGSQVQ RPLATVVVGG
MLIGPIMLLV IVPALRMVFI GKKET
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