| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5245 |
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| Symbol | |
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| ID | 4042106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1944017 |
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| End bp | 1944928 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637980663 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_587373 |
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| Protein GI | 94314164 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.204558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGACC TGCGCCGTAT CGACCTGAAC CTGCTGTTGA CATTGCACGC CTTGCTGACC
GAGCAGCATG TGACGCGTGC CGCCGTGCGG CTGCACAAGA GCCAGCCGGC CGTCAGTCAC
GCGCTGGCCC AGTTGCGCGA TATCTTCGAC GACCCGCTGC TGGTGCGTCG CGAGAACGGC
CTGACGCTCA CCGCGCGCGC GCGCGATTTG CTGGGCCCGC TGGACGATGC ACTGGGTCAA
TTGAACGGAC TGGTGGGCGA ATCCACGTTC GACGCCGCCC ATGCGCGCCG CTGTTTCCGG
CTGGCTCTGT CCGACTATGG CGCGCGCAGC GTGTTGCCCG CGCTGATGCG ACGGCTGCGC
CGCGAGGCGC CCGGCATCGA CGTTGCCGTG GTCCAGGCTG GCCGCGAGGC GATGCTCGCG
CAGCTTGCCG ACGGGGAGAC CGATCTGGCG ATCGGTGTCT TTCCACGGCT GCCCAGCGAT
ATCGAGGTGG CTACGCTGTT CGAAGACCAC TACACGAGCG TGGCGGACCG GGCCACGCTG
CCTCGGCGGG GGCCGCTGTC GGTGGAGGGC TGGCTGGCGC GGCCGCATGT GCTGGTGGCG
ATGCGTCCCG ACGCGCCCAG TGAGATCGAT CTCGCCCTGG CCGAGGCTGG CATGCAGCGG
CATGTGGCCC TGGTGCTGCC TCATTGGGGC GCTGCGCTCG ATCTCGTGCC CGGCACCGAC
CTGATCCTGA CCGTCGCGAC CCGCGCGGTT GCCGCGGCGC CAAATCGCGC GCTGCGGGCG
TTCGCGCCGC CGATCGCGCT GGCGCCAGTG CCGTTCCAGC AGGCATGGCA CGCGCGGCGC
AGGGCCGATC CCGCGCATCG CTGGCTGCGC CAGACAGTGT GGGAGTGCAG CCAGCAGCCT
GAGGGCACCT AG
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| Protein sequence | MDDLRRIDLN LLLTLHALLT EQHVTRAAVR LHKSQPAVSH ALAQLRDIFD DPLLVRRENG
LTLTARARDL LGPLDDALGQ LNGLVGESTF DAAHARRCFR LALSDYGARS VLPALMRRLR
REAPGIDVAV VQAGREAMLA QLADGETDLA IGVFPRLPSD IEVATLFEDH YTSVADRATL
PRRGPLSVEG WLARPHVLVA MRPDAPSEID LALAEAGMQR HVALVLPHWG AALDLVPGTD
LILTVATRAV AAAPNRALRA FAPPIALAPV PFQQAWHARR RADPAHRWLR QTVWECSQQP
EGT
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