| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5165 |
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| Symbol | |
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| ID | 4042026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1864220 |
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| End bp | 1864915 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637980583 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_587293 |
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| Protein GI | 94314084 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.162111 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTGC GCACGCTTGC CGCCGATCTG ACCTTGCCTG CGCCGGCGTT GCTGGTGGAG
GACGACCCAT TGGTCTCTCG CCGGCTGGAG AACCTGCTGC AACAGCTCGG CTATGCGCCA
GATGCGCTTG TACTGGCCGC TTCGCTGGCC GAAGCACGCG CCCGCGTGAC GGACCAGCCC
GTGGCGCTGG CACTGGTGGA CCTGGGCCTG CCCGATGGCA GCGGCATCGA CCTGATCGCC
GAGTTGCGCG CGGCCGACCC CGGACTGGGC ATTCTCGTGA TTTCCGCATG GAGCACCCAG
GATGCGATCC TGGCCGCCCT GCGTGCCGGG GCCACCGGCT ACGTGGTCAA GGAACGCGAC
GATCTTGAAG TTGCACTGGC CCTGCGCAGC GTGCTGCGCG GCGGCGCGCC CATCGACCCG
TTCATCGCCC GGCGCATCAT TGAGGAACTG CATCCCGGCC CGAGCGAGTC GGCCAATGCC
CAGACACCCG AACCATCGAC CGAACGCCTG AGCCCGCGCG AACACCAGAT CCTGCGACTG
GTGGCAGATG GGCTGGGCAA CCGCGAGATC GCCGAGCGCC TGTTCCTCTC GCGCTACACC
GTGGAATGCC ACATCAAGCA TATCTATCGC AAGCTCGCCG TCTCGTCGCG CACCAGGGCG
ATCAACGCGG CGCGCTCGCG TGGCTTGCTG GGATGA
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| Protein sequence | MPLRTLAADL TLPAPALLVE DDPLVSRRLE NLLQQLGYAP DALVLAASLA EARARVTDQP
VALALVDLGL PDGSGIDLIA ELRAADPGLG ILVISAWSTQ DAILAALRAG ATGYVVKERD
DLEVALALRS VLRGGAPIDP FIARRIIEEL HPGPSESANA QTPEPSTERL SPREHQILRL
VADGLGNREI AERLFLSRYT VECHIKHIYR KLAVSSRTRA INAARSRGLL G
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