| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5087 |
|---|
| Symbol | |
|---|
| ID | 4041948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 1776046 |
|---|
| End bp | 1777494 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637980505 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_587215 |
|---|
| Protein GI | 94314006 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5476] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00418234 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.445331 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTGTGT TCAGCGCTTC CCTCGCCACC GAGACCAATA CTTTCGCACC GATGCCGACC
GGGCTCGCAT CGTTTCGCGA CCGTGGTTAC TTCCCGGCCG GCCAGCATCC GGACCAGATG
ACCTTCTTTT CCGGACCGCT GTGGGCCGCG CGCCTGCGCG GCAAGGAGCG CGGCTGGACG
TTGCTGGAAG GCATGGTTGC CGGCGCCCAG CCCAGCGGCA CCACCACGCG GCACGCCTAT
GAAACGCTGC GCGAGGAACT GCTGGCCGAT CTGCGCGCGG CGCTGCCGGT GGACATGGTG
CTGCTCGGCC TGCACGGCGC CATGGTCGCC GATGGCTACG ACGACTGCGA AGGCGACCTG
CTGCAACGGG TGCGCGCCAT TGTCGGCCCC GATGTGGTGA TTGGCGCGGA ACTCGATCCG
CACTGCCACC TGTCGCCCGC CATGACCACG CATGCCGACC TTCTGATCGC CTTCAAGGAG
TACCCGCACA CAGACGTGCT CGAACGCGCG ATCGAACTGG TCGACCTGTG CGCGGCCAAG
GTGGAGGGCA AGATCCGTCC GGTACCGGCG GTGGTCGACT GCGGCATGAT CGTCACGGTG
CATACGTCGC GCCAGCCTGC GCGTGGCTTC GTCGACCGCA TCCAGGCACT GGAAGGCCAC
AACGGCGTCC TGTCGATCTC GATCGCGCAC GGATTCTCCT GGGGCGACGT ACCCGAGATG
GGCACCAGGG TACTGGTCTA CACGGACGGC GACGCTACCG CGGCCCAGAC GCTCGCACGC
CGGCTGGCCG ATGAACTGAT CGACATGCGC GAGGCGCTCG ACGTGCCGTA CCCCCGCATC
GACGCCGCGC TGGACGAGGC ACTGGCCTTT GACGGTGGCC CGGTGGTGCT GGCGGATGGC
GCCGACAACC CGGGCGGTGG CGCGGCGGGC GATTCCACCT TCATCCTGCG TCGCATGATC
GAACGTGGCA TCGTCAATGC GGCCATCGGC CCGATGTGGG ACCCAATCGC GGCACGCATC
GCGTTCGAGG CCGGCGTGGG CGCGCGCCTG CCGCTGCGCA TCGGCGGCAA GATCAGCCCG
CTCTCCGGCG AGCCGCTGGA TCTGGATTGC ACAGTCAAGG CGCTGATGCC CGACATGGTG
ATGACCGGCC TGGCCAACGC TCCCATGCAG ATGGGCGACA GTGCGCTCGT GGAGGCCAAC
GGCATCGACA TCGTTCTGAT CACGCTGCGC AACCAGGCCA TGGGAACCGA TCTCTTTACC
CAGCTTGGCT GCGACCTCGC CGCAAAGAAG ATCATCGTGG TCAAGTCGTC GCAGCATTTC
TACGCGTCCT TCGCGAAGAT CGCGCGCCAC GTGATCTATG CCGGAGCGCC GGGTGCGGTG
ACGCTGGACC TGCGTACCCT GCCCTACCGC AAGGTTCACC GCCCGAAGTG GCCCCTCGAT
CCCGCCTGA
|
|---|
| Protein sequence | MRVFSASLAT ETNTFAPMPT GLASFRDRGY FPAGQHPDQM TFFSGPLWAA RLRGKERGWT
LLEGMVAGAQ PSGTTTRHAY ETLREELLAD LRAALPVDMV LLGLHGAMVA DGYDDCEGDL
LQRVRAIVGP DVVIGAELDP HCHLSPAMTT HADLLIAFKE YPHTDVLERA IELVDLCAAK
VEGKIRPVPA VVDCGMIVTV HTSRQPARGF VDRIQALEGH NGVLSISIAH GFSWGDVPEM
GTRVLVYTDG DATAAQTLAR RLADELIDMR EALDVPYPRI DAALDEALAF DGGPVVLADG
ADNPGGGAAG DSTFILRRMI ERGIVNAAIG PMWDPIAARI AFEAGVGARL PLRIGGKISP
LSGEPLDLDC TVKALMPDMV MTGLANAPMQ MGDSALVEAN GIDIVLITLR NQAMGTDLFT
QLGCDLAAKK IIVVKSSQHF YASFAKIARH VIYAGAPGAV TLDLRTLPYR KVHRPKWPLD
PA
|
|---|
| |