Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5033 |
Symbol | cusA |
ID | 4041895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1719297 |
End bp | 1722464 |
Gene Length | 3168 bp |
Protein Length | 1055 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637980454 |
Product | copper and silver tricomponent efflux pump cusA |
Protein accession | YP_587164 |
Protein GI | 94313955 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.252663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGCAC GCATCATCCT CGCGTCGATC CGCAACCGCT TCCTGGTGCT GCTGGCCACG ATCATGCTGA CGGCCTGGGG GCTATGGGCA GTCGGCACCA CGCCGCTCGA CGCGCTGCCG GATCTGTCCG ATACCCAGGT CATCATCCGC ACCCCGTTCC CGGGCCAGGC GCCGCAGATC GTCGAGAACC AGGTCACCTA CCCGCTCACC ACGACGATGT TGTCCGTGCC GGGGGCCAAG ACCGTGCGCG GCTATTCCTT CTTCGGCGAT TCCTTTGTCT ACGTGCTGTT CGAGGACGGA ACCGACCCAT ACTGGGCCCG CTCCCGCGTG CTGGAGTACC TGAACCAGGT GCAGTCACGT CTGCCGGCGG CCGCCAGGCC CGCACTGGGG CCCGACGCCA CCGGTGTGGG ATGGGTCTAT GAGTATGCGC TGGTCGATCG CACCGGCAAG CACGACCTGA GCCAGTTGCG CGTGTTGCAG GACTGGTTCC TGCGCTTCGA GCTGAAGTCG CTGCCGAACG TCTCCGAGGT AGCCTCGCTG GGCGGCATGG TGCGGCAATA CCAGGTAGTG CTGAAGCCTG ACCGCCTACG TGCCTACAAC CTTCCGCAGG CGAAGGTGAT CGCCGCGATT CGTGGCGCCA ACCAGGAGGC AGGCGGCTCG GTGCTGGAGC TAGGCGAAGC CGAGTATATG GTCAGGGCAT CGGGCTACCT GAAGACACTC GACGATTTCC GGCAGATTCC AATCGAGACC AGCGCGGCCG GTGTTCCGGT GCGCCTTGGC GACGTCGCGA CGATCCAGTT CGGGCCCGAG ATGCGACGTG GCATCTCCGA CCTCAACGGC GAAGGCGAAG TGACGGGCGG CGTCATCGTG ATGCGTTCGG GCAAGAACGC GCTGGAGACG ATCGACGCCG TCAAGGCCAA ACTTGCAGTG CTGAAGAAGA GCCTGCCCGC CGGCGTCGAG ATTGTCACGA CCTACGACCG CTCCGCGCTG ATTCATCGCG CGGTGAACAA CCTCTCGTAC AAACTGGCCG AAGAGTTCGT GGTCGTCGCG CTGGTCTGTC TGATCTTCCT GTTCCACCTG CGCTCCGCGC TGGTTGCCAT CGTGTCGCTG CCGCTTGGCG TGCTGGCTGC CTTCCTCGTC ATGCGGTATC AGGGCGTCAA CGCCAACATC ATGTCGCTCG GCGGCATCGC CATTGCAGTC GGCGCCATGG TCGACGCCGC AGTGGTAATG ATCGAAAACG CGCACAAGCA TCTGGAACGC TGGCATGCCG ATCACCCCGG GCGGCCACTC TCCGGCGACG ACCGCTGGCG CGTGATTGGC GCATCCGCAG CGGAAGTCGG TCCCGCGCTG TTTTTCTCGC TGTTGATCAT CACGCTGTCT TTCATCCCGG TGTTCACGCT GGAAGCACAG GAAGGCAAGA TGTTCTCGCC GCTGGCCTTC ACGAAGACCT ACTCGATGGC GGCTGCGGCA GGCCTCTCGG TGACACTGGT GCCGGTGCTG ATGGGTTACC TGATTCGCGG CCGCATTCCC GCCGAGCAGG CCAACCCGCT GAACCGCTGG CTCATTCGCG CCTACCAGCC AATCCTGACC CGCGTGCTGG CCTATCCGCG CGCGACCATC GCACTGGCGG TTGTTGCGCT GGTGGCCACC GCCTGGCCAA TCATGCGGAT TGGCGGCGAG TTCATGCCGC CGCTCGATGA AGGCGATCTG CTCTACATGC CCTCCGCTTT GCCCGGCCTT TCCGCTGGCA AGGCGGCGCA ATTGCTGCAG CAGACCGATC GGCTGATCAA GTCGGTGCCG GAAGTCGCCA CGGTGCAGGG CAAGGCCGGC CGTGCCGATT CGGCCACCGA CCCGGCCCCG CTGGAGATGT TCGAAACCAC AATCCAGTTC AAGCCACGCG ACCAGTGGCG CCCGGGCATG ACACCCGACA AACTCGTCGA AGAACTTGAT CGCGTGGTGA AGATTCCGGG ACTTTCCAAC ATCTGGGTGC CACCGATCCG CAACCGCATC GACATGCTGG CCACCGGGAT CAAGAGCCCG GTTGGCATCA AGGTGGCAGG CACCGACCTG AAGGAGATCG ATCGGCTTGC CACCCGCATC GAAGAAGCCG TGAAGCCCGT TCCCGGGGTC ACCTCGGCAC TGGCGGAACG CCTGACCGGC GGGCGCTATA TCGACGTTGA CATCGACCGC GCGGCCGCTG GCCGGTACGG GCTCAATATC GGCGATGTGC AGGCCGTCGT CTCCTCGGCG ATTGGTGGCG AAAACATCGG CGAAGTGGTC GACGGGCTGG CCCGCTATCC CATCAACGTG CGCTACCCGC GCGACTATCG CGATTCGGTC GAGCAACTGC GGAGCCTGCC CATCGTGACT GACCGTGGCC AGCAGATCGT GCTTTCCGAC GTCGCCCGCA TCCGAGTGGA ACAGGGTCCG CCGATGCTGC GCAGCGAGAA CGCACGGCTG TCGGGGTGGA TCTACGTCGA CATCCGTGGG CGCGACCTGC GCTCCGCGGT GCGCGACATG CAGGCGGCGG TGAGCAAGGC GGTACCGATG CCTGCGGGCT ATTCGCTGAG CTGGTCCGGT CAGTTCGAGT ATCTGGAACG TGCCGCGGCG AAGATGAAGG TAGTGGTGCC GTTCACGCTG CTGATCATCT TCGTGCTGCT CTACCTGGTC TTCGGTCGAC TCGACGAGGC ACTGCTGATC ATGGGCACGC TGCCCCTGGC GCTGATCGGC GGCTTCTGGC TGCTTTATCT GCTCGGCTAC AACCTGTCGG TAGCCGGCGT GGTCGGCTTC ATCGCGCTGG CCGGCGTTGC CGCGGAGTTC GGCGTGATCA TGCTGCTCTA TCTCAAGCAC GCCTGGGAGG ATAGCCAGGC ACGCGGCATC ACCGACATCA ACGCCCTGCT CGCCGCCATC CAGGAAGGCG CTGTGCAGCG CGTGCGGCCC AAGGCGATGA CCGTCGCCGT CATCCTGGCA GGCCTGATCC CGATCATGTG GTCACACGGC ACCGGCTCCG AAGTCATGCA GCGCATTGCG GCGCCGATGG TTGGCGGCAT GGTGACGGCG CCGCTGCTGT CGCTGTTCGT GGTGCCCGCC GTGTACCTGT TGATCCGCCG TCGCGAAACG AAGACTTCCC CATCATTCAC TCACACGTCC GTCAAGGAGC AAGCATGA
|
Protein sequence | MIARIILASI RNRFLVLLAT IMLTAWGLWA VGTTPLDALP DLSDTQVIIR TPFPGQAPQI VENQVTYPLT TTMLSVPGAK TVRGYSFFGD SFVYVLFEDG TDPYWARSRV LEYLNQVQSR LPAAARPALG PDATGVGWVY EYALVDRTGK HDLSQLRVLQ DWFLRFELKS LPNVSEVASL GGMVRQYQVV LKPDRLRAYN LPQAKVIAAI RGANQEAGGS VLELGEAEYM VRASGYLKTL DDFRQIPIET SAAGVPVRLG DVATIQFGPE MRRGISDLNG EGEVTGGVIV MRSGKNALET IDAVKAKLAV LKKSLPAGVE IVTTYDRSAL IHRAVNNLSY KLAEEFVVVA LVCLIFLFHL RSALVAIVSL PLGVLAAFLV MRYQGVNANI MSLGGIAIAV GAMVDAAVVM IENAHKHLER WHADHPGRPL SGDDRWRVIG ASAAEVGPAL FFSLLIITLS FIPVFTLEAQ EGKMFSPLAF TKTYSMAAAA GLSVTLVPVL MGYLIRGRIP AEQANPLNRW LIRAYQPILT RVLAYPRATI ALAVVALVAT AWPIMRIGGE FMPPLDEGDL LYMPSALPGL SAGKAAQLLQ QTDRLIKSVP EVATVQGKAG RADSATDPAP LEMFETTIQF KPRDQWRPGM TPDKLVEELD RVVKIPGLSN IWVPPIRNRI DMLATGIKSP VGIKVAGTDL KEIDRLATRI EEAVKPVPGV TSALAERLTG GRYIDVDIDR AAAGRYGLNI GDVQAVVSSA IGGENIGEVV DGLARYPINV RYPRDYRDSV EQLRSLPIVT DRGQQIVLSD VARIRVEQGP PMLRSENARL SGWIYVDIRG RDLRSAVRDM QAAVSKAVPM PAGYSLSWSG QFEYLERAAA KMKVVVPFTL LIIFVLLYLV FGRLDEALLI MGTLPLALIG GFWLLYLLGY NLSVAGVVGF IALAGVAAEF GVIMLLYLKH AWEDSQARGI TDINALLAAI QEGAVQRVRP KAMTVAVILA GLIPIMWSHG TGSEVMQRIA APMVGGMVTA PLLSLFVVPA VYLLIRRRET KTSPSFTHTS VKEQA
|
| |