Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4855 |
Symbol | |
ID | 4041717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1513014 |
End bp | 1514789 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637980276 |
Product | putative two-component hybrid histidine kinase, periplasmic sensor |
Protein accession | YP_586986 |
Protein GI | 94313777 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.268249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.362022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTCCT CCGTGCTGCC TCACTATGAC GAGCCGCGCC TGCTTGCGGC GCAGATGGAG CTGATCGACC AGAGCTTCGG CATCGCGATG CTTGGCTGCT CGCTTGCGGC GATCATCCTG GCAGTCGGCC TGACGGTCAC GGGTGGACAC CCCGGCGCCA TGCCATGGGC CGCGGCGATG GTCGTGCTCT GCGCCATCGC CCATTTCGGC CGGCTGGCCG TGCCCGATCG TCTGACCGAG GCGCGCGCGG GACGTTACGC GCGCGCCATG ACCGTCATGC TAGTGCTGAT CGGCAGCCTG TGGGGACTGG TGGCCTGGCT CTACCTAGAT ATCCGGTCGC CCGCCGTGGT GATCTGCGTG CTGTCGCTGA TTGCCGGCAT GAGCGCGGCG GCGCTGGCGA TCTTCTCGGC CTGTCTGCCG GTGGCCATCG GTTTCTTCAT TCCCGCGATC CTGCCCGTAT GGATCGTATT CCTGCTCACG CATGACATTG CCTACCTGCC GATGTTCTTT GGTACGCCGC TGTATCTGGT GGTGCTGCTG ATCTTCGCGC GCAACTACTC GCGCGTGGCG TGTCATTCGA TTGCGCTGCG CTTCGAGAAT GTCGAACTGA TCTCGCAGCT ACGCGACCAG ACCGCGCGCG CCGGACAGGC TTTGCGCGAG GCCGAGAACG CAAATCGCGC CAAATCGGTG TTCCTGGCAT CGGCCAGCCA TGACCTGCGC CAGCCCCTCC ATGCGCTGGG CCTGTTTCTC GTGTCACTCG GGCGCACGCC GCTGGATGCG CACCAGCGCC AGTTGCTGGA CCACATCGAG GCGTCGTCCG GCGCGGCGCG GGAGATGCTC AACACGCTGC TCGATTTCTC GAAGCTCGAG GCAGGTGTGA TCACCGCGCG ACCGCGCCCG TTCAGGCTGC AGCCGATGCT GCACAAGCTT GAGAACGAGT TCGCGCCGCA GGCGAATGCG CGTGGACTGG TCTATCGCAC CCGCGATACC ACGGCTACGC TGTTTGGCGA CCCGGCGCTG GTCGAACTGA TCCTGCGTAA CCTGATCGCC AACGCGATCC GCTACACGCA TACCGGCGGC GTGCTGATCG CCTGCCGGCC CCGGCGCTTC CATGCTTCGA TCGAGGTCTG GGATACCGGC ATCGGTATTC CCATCGCGCA GCACCGCGAG ATCTTTCGCG AGTTTCACCA GCTCGGCAAC CCGGAGCGCG ACCAGCGCAA GGGGCTTGGG CTAGGTCTGG CTATCGTCGA CGGGTTGGCG CGCACGATGC AGACCCGCGT AACGCTGGAT TCGATACCGG AACGCGGCTC GGTATTCCGT CTGCAACTGC CACTGGCCTG GGCCGCGCCC GAGGAAGTCA CGTTCCCAGG CAGCGTGATC CGCCTGGATG GCCTGCGCGT GCTTGTCATC GACGACGATC CGGCAATCCG CCAGGCAATG GCCGAACTGC TGGCGGCCTG GGATTGCGAC TGCCGGCCCG CCGAATCCGA GGACGAGGCG CTGGGCCTGC TCGGCACCTT CACCCCCGAC CTGATCCTGG CCGACTACCG GCTGCGTGGC CATCGCAACG GCCACGAAGC CATTGCGGCG ATCCGCGAGC GCACCAGCCA GGCGCTGCCG GCCATCATCA TCACCGGCGA TACGGCGGCG GATCAGCTTC GCAACGTTCA CGCGGGTGGC ACCGCGCTGC TCCACAAGCC CGTGGTCCCG GGCGAACTCC ATTCGGCCAT TGGCGCCCTG CTCCGGGGCT CCGAATGGTA TCGGGTCCAA CAATAA
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Protein sequence | MWSSVLPHYD EPRLLAAQME LIDQSFGIAM LGCSLAAIIL AVGLTVTGGH PGAMPWAAAM VVLCAIAHFG RLAVPDRLTE ARAGRYARAM TVMLVLIGSL WGLVAWLYLD IRSPAVVICV LSLIAGMSAA ALAIFSACLP VAIGFFIPAI LPVWIVFLLT HDIAYLPMFF GTPLYLVVLL IFARNYSRVA CHSIALRFEN VELISQLRDQ TARAGQALRE AENANRAKSV FLASASHDLR QPLHALGLFL VSLGRTPLDA HQRQLLDHIE ASSGAAREML NTLLDFSKLE AGVITARPRP FRLQPMLHKL ENEFAPQANA RGLVYRTRDT TATLFGDPAL VELILRNLIA NAIRYTHTGG VLIACRPRRF HASIEVWDTG IGIPIAQHRE IFREFHQLGN PERDQRKGLG LGLAIVDGLA RTMQTRVTLD SIPERGSVFR LQLPLAWAAP EEVTFPGSVI RLDGLRVLVI DDDPAIRQAM AELLAAWDCD CRPAESEDEA LGLLGTFTPD LILADYRLRG HRNGHEAIAA IRERTSQALP AIIITGDTAA DQLRNVHAGG TALLHKPVVP GELHSAIGAL LRGSEWYRVQ Q
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