| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4791 |
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| Symbol | |
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| ID | 4041653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1435784 |
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| End bp | 1436770 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980212 |
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| Product | putative secretion protein HlyD family |
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| Protein accession | YP_586922 |
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| Protein GI | 94313713 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.112705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA GACTCTCCTC GCTCGGGCCA GTTGTGCTGA CGCTGGCCGT CACCGCCGTT
GGCGCGGTCG TCGTCAAACA CCTGTGGGAC TACTACACCG TGGCGCCGTG GACGCGCGAC
GGTCACATTC GCGCCGAGGT GGTGCAGGTG GCGCCCGATG TCTCCGGGCT GGTCACGCGG
ATCGCGGTCA AGGACAACCA GCATGTGAAG GCAGGCGACG TCCTGTTCGA GATCGACCAC
GAGCGCTATG CGCTGGCGCT GCGTCAGGCG GAAGCCACGG CGGCGGCGGT GCGCGCCAAT
CTGGCCCAGG CACGCCGCGA GGCGAAGCGC AGCCAGACGC TTTCCGAGGT GGTTTCCAAG
GAAATCGTCG AAGAGGGGCT GGCCAAGGTG CAGCAGGGCG AGGCCCAGCT GGCACAGGCC
GAGGCCGCGA TCGGCGTGGC GAAGCTGAAT CTGGAGCGCA CCCACGTGGT GAGCCCGGTG
GAAGGCTACG TCAACGACCG CCTGCCGCGT CTGGGGGATT ACGTCGTGAC CGGCAAGCCG
GTGCTGTCGA TGGTCGATTC GAACTCGTTC CACGTGGAAG GCTACTTCGA GGAAACCAAG
CTGAAGGGTA TCCATATCGG CAGCCCCGTC GATATCCGCG TCATGGGCGA GAAGCGCGTG
CTGCACGGCC ATGTGCAGAG CATCGCAGCC GGTATCGAAG ACCGTGATCG CACCAATGGC
TCGAACCTGC TGCCGAACGT GAATCCGACG TTCAACTGGG TGCGTCTGGC GCAGCGCGTG
CCGGTGCGCA TCCAGTTCGA CCAGATGCCC GAGGATGTGC GCCTGGTGGC AGGACGCACG
GCCACCGTAT CGGTGAAGGC CGATGACGAG AAGAACATCG GGGAAACGGG AGACAAGCCG
ACCGCGCCGG CGGCCGGCCG TAGTGCCTCG CAGGACAAGG TTGCGCTGGC CGGCAAGCGC
GCGCCCTCAA CCGGAGCAGT GCAGTGA
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| Protein sequence | MKLRLSSLGP VVLTLAVTAV GAVVVKHLWD YYTVAPWTRD GHIRAEVVQV APDVSGLVTR
IAVKDNQHVK AGDVLFEIDH ERYALALRQA EATAAAVRAN LAQARREAKR SQTLSEVVSK
EIVEEGLAKV QQGEAQLAQA EAAIGVAKLN LERTHVVSPV EGYVNDRLPR LGDYVVTGKP
VLSMVDSNSF HVEGYFEETK LKGIHIGSPV DIRVMGEKRV LHGHVQSIAA GIEDRDRTNG
SNLLPNVNPT FNWVRLAQRV PVRIQFDQMP EDVRLVAGRT ATVSVKADDE KNIGETGDKP
TAPAAGRSAS QDKVALAGKR APSTGAVQ
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