| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4726 |
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| Symbol | |
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| ID | 4041587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1368754 |
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| End bp | 1370784 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980147 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_586857 |
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| Protein GI | 94313648 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0452393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCGGT GCAGCGCGAT CGTCGTGCAT GAATGTGACG ATAACGTGAC ACCCCCTGAA
TGGGTGGCGT CGTCATACTG GCGACACATT GCTGTCATGA AATGGCGGAC GCTCCATTTA
TCGTTCGCGC CGAAAGCCGC CTCGTGGCAT CACGGCCTCC CGGCCGATAA CCTGCCATTC
AACCCTTATC CGCATGTCAT GCTGACCGTC GCCTCCTCGT TGGCCACGGC CCGAGAGGCT
GTGTGCCTGC CTTCGCTGCA GGCGGTATTC CAGCCTATCG TGTCGCTGGG CAATGGGGAC
ATTCTTGGTC ATGAGGCGTT GATTCGCGGC CCGGCCGCAT CGTTGCACGA GATGCCTGAC
GCCTTGTTCC GACGCGCGCA GGCAAATGGG ACAACCGTGG CGCTTGAAGT GGCGGCAGCC
CGTACCGCGC TCGATGCGTG GTCGTCGCTG AACCTGCCCG GCAAGCTGTT CCTGAACTTC
AGTCCATTGA CGCTGCGCCA TCTTCTGGTC GGGCGTGGAC ACGCCATGGC CGCGTTGCTG
GGGGCCGATG GCATTGTCGG CGGAGCGGCG GCTATCGCAC CATCCCGGGT CGTCATCGAG
ATCACGGAGC AGACTGCCAT CGGCAATGCC CAGACCTTTG GCGAGGCCAT GGCGTTGCTC
GGCGAGCTAG GCGTGCATTA CGCTCTGGAC GATTTCGGCT CGGGACATGC CAATCTCGAC
ATGCTGGCCG ATCTGTCGCC GCAGTTCATC AAGCTGGACA AGTCGCTCGT GCGCGGGATA
GGCACGTGCT CGCGCCGGCT GGAGATACTG CGCGGGATGC TACGCATGAT GGGAGCATTC
GGTGGGCACG TGATCGCAGA AGGCATCGAG CGGGCCGAGG AACTGGCCAT GGTGCGGGAT
CTTGGTGTTT TCGCGGGCCA GGGCTACTTT TTGGGGAGGC CAGTGGCGCA GCCTGAACGG
CAAGCGTCGC TGGAGGTGCG GGCTGTGCTG GCCTCGCGTC AGATCGCGGT GTTTCCCCAA
GCCTTGCGCT CGGGGTGGTC GGGCATGACA GCCGGGCAAC TCCTGCGCCC CGCGCCCACG
ATTCATCCGG CTACCTCCAA TAACGACGTC CTGGCGCGGT TTCACAGCCA GCCCGATCTG
CACGCCATGG CGGTGGTGGA CGAGGCCATG CGGCCGGTGG CGATGATGAA CCGGCAAATC
CTGATCGACC GCTACGCCAC GCCATTTCAT CGGGAACTCT ATGGCAGGAA GGCCTGCATC
ACGATCGCCA ATCCGGCGCC AGTTTGCTTC GACCGCCGCA CCAGTCTGGA GGATATGGCC
GAACTCTTCG CGGGCGAGCA ATCGCATGTG CTGGCCGATG GTTTCGTGAT CACTGATCAA
GGCAGATACG TGGGTCTTGG CACCGTGGCC GATTTGCTAC GCGCCACCAC CGAGGTACGC
ATGGAGGCGG CACGTTATGC GAATCCGCTG ACGTTCCTGC CCGGAAACAT CCTGCTGAAC
CAGCACGTCG ACCGACTCAT CGCAGCTGGC AGCGCGTTCC ATGCGTGCTA CGTCGACCTC
AACCAGTTCA AGCCATTCAA CGATCGCTAC GGCTACTGGA AGGGCGACGA AATGCTGAAG
GGCGCGGCCG CGATTCTGGC GCAGGCTTGT GACCCCGCGC GCGACTTCCT TGGACATGTC
GGCGGCGACG ACTTCCTGGT GTTGTACCAG GGGGACGATT GGGAGGTGCG TATCCGGGAC
GCCATCGCAC GCTTCAACGA TGCGGCACTG ATGTCGTACT CGTCGACGGA TCGTGCTGCT
GGCGGTATTC ACGGCGAGGA CCGGTTCGGC AATCCGGCGT TTTGCGTGCC GGTAACGATG
GCCGCCGGCG TGGTCAGTGT CGGTGCGGAA GCAATGGCGA CGCTGCGGCT ATGCAGTCAG
CATATCGGCG CGGCCTCGGC GGTGGCCAAG CGCAGCGCCA AGCGCGCGCC ATCAGGCGTT
GCGCGGATCG ATATCGCCGA ACTGGCTGCG CGCGGCGCGC TCGATATCTA G
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| Protein sequence | MLRCSAIVVH ECDDNVTPPE WVASSYWRHI AVMKWRTLHL SFAPKAASWH HGLPADNLPF
NPYPHVMLTV ASSLATAREA VCLPSLQAVF QPIVSLGNGD ILGHEALIRG PAASLHEMPD
ALFRRAQANG TTVALEVAAA RTALDAWSSL NLPGKLFLNF SPLTLRHLLV GRGHAMAALL
GADGIVGGAA AIAPSRVVIE ITEQTAIGNA QTFGEAMALL GELGVHYALD DFGSGHANLD
MLADLSPQFI KLDKSLVRGI GTCSRRLEIL RGMLRMMGAF GGHVIAEGIE RAEELAMVRD
LGVFAGQGYF LGRPVAQPER QASLEVRAVL ASRQIAVFPQ ALRSGWSGMT AGQLLRPAPT
IHPATSNNDV LARFHSQPDL HAMAVVDEAM RPVAMMNRQI LIDRYATPFH RELYGRKACI
TIANPAPVCF DRRTSLEDMA ELFAGEQSHV LADGFVITDQ GRYVGLGTVA DLLRATTEVR
MEAARYANPL TFLPGNILLN QHVDRLIAAG SAFHACYVDL NQFKPFNDRY GYWKGDEMLK
GAAAILAQAC DPARDFLGHV GGDDFLVLYQ GDDWEVRIRD AIARFNDAAL MSYSSTDRAA
GGIHGEDRFG NPAFCVPVTM AAGVVSVGAE AMATLRLCSQ HIGAASAVAK RSAKRAPSGV
ARIDIAELAA RGALDI
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