Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4577 |
Symbol | dppC |
ID | 4041438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1192230 |
End bp | 1193156 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637979998 |
Product | binding-protein-dependent transport systems inner membrane protein |
Protein accession | YP_586708 |
Protein GI | 94313499 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0046213 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACACC CCTCCGTCGA TCCACGCGCC GTGTCCCCTT CGCTCGTGAC GGCCCAGGCG CCTCCCGCCT CGCGCAGGCG CTCCCGGTTT CCCATGATGC GCCGACTGTT CCGCGACAAA CCGCTCGGCG CGGCCGGCGC CGTGATCTGC GCGATCTTCT TGTTCTGCGG CGTCTTTGCC GGCTGGCTCG CGCCATACGG TGTCAACGAG ATCAACATGA TGGCGCGGCT GCAACCACCG TCATGGGCGC ATCTCTTCGG CACCGACAAT CTCGGCCGTG ACATCTTCTC CCGCTGCCTG TATGGCGCGC AGCTGTCGGT GGTGATCGGC CTCTCGGCGG CCACGCTGGC CACGCTGGTT TCCCTCGTGC TTGGCATCCT GTGCGGCTAT CTGGGCGGCA AGCTGGACCT GGTGGTGCAG CGAATGGTCG ACGCCTGGAT GAGTTTTCCG GACCTCATCA TCCTGATCGT CGTGGTCTCG GTGCTGGGCC CGGGCAGTTG GCAAATCGTC TGCACGCTGG GTCTGCTGCT CGGTATCGGC GGCTCCAGAA TCGTGCGCGG GGCCGTGGTA TCGGTGCGCG AGAACATGTA CGTGCACGCG GCGCAATCGA TCGGCGCCTC CACCAGCCGC ATCCTGTGGC GGCACATCCT GCCCAACGTG CTGCCGCCGG TGATCGTCCT GTTCACGACC CGCGTCGGCA CCGCGATCCT GGCGGAATCG GGACTGTCAT TCCTGGGCCT CGGCGTGCCG CCGCCCGCCC CGACCTGGGG CGGCATGCTG TCGGGCGACG GGCGCACCTT CATGTTCCAG GGGCCGTGGC TCGCGCTTGC GCCAGGCATC TGCCTGACGG TGGTGGTCTA CGCCATCAAC GTCTATGGCG ATGCCATGCG CGACCTGCTC GACCCACGCC TACGCGGCGG CCGCTGA
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Protein sequence | MAHPSVDPRA VSPSLVTAQA PPASRRRSRF PMMRRLFRDK PLGAAGAVIC AIFLFCGVFA GWLAPYGVNE INMMARLQPP SWAHLFGTDN LGRDIFSRCL YGAQLSVVIG LSAATLATLV SLVLGILCGY LGGKLDLVVQ RMVDAWMSFP DLIILIVVVS VLGPGSWQIV CTLGLLLGIG GSRIVRGAVV SVRENMYVHA AQSIGASTSR ILWRHILPNV LPPVIVLFTT RVGTAILAES GLSFLGLGVP PPAPTWGGML SGDGRTFMFQ GPWLALAPGI CLTVVVYAIN VYGDAMRDLL DPRLRGGR
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