Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4568 |
Symbol | codA |
ID | 4041429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1181175 |
End bp | 1182455 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637979989 |
Product | cytosine deaminase |
Protein accession | YP_586699 |
Protein GI | 94313490 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000171713 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0375176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGACA CCATCCTGCG CCACTGCAAT ATGCCTGACG GACGTACCGA TATCGATATC GGCATTGCCA ACGGGCGGAT CGCGGCGGTG GAGCCACGGA TCGCGGCAAC GGCGGGCGAG GAGATCGACG CTGCTGGACA GCTTGTCTCG CCGCCGTTCG TCGATGCGCA CTTCCATATG GACTCCACGC TGTCATACGG CCTGCCGCGC GTGAACCAGT CCGGCACGCT GCTCGAGGGC ATCGCGCTGT GGGGGGAGCT GAAGCCGCTG CTTACGCAGG ATGCCATCGT CGAGCGCGCG CTGGCGTATT GCGACTGGGC CGTCTCCAAA GGGCTGCTGG CGATCCGTTC CCACGTGGAT GTGTGCGATC CGCGCCTGCT GGCCACGGAG GCGCTGCTGC ACGTGCGTGA GCGCGTCAGG CCCTACCTGG ATCTGCAACT CGTGGCATTT CCGCAGGACG GTCTGCTGCG CGCACCGGAT GCGCTCAACA ACCTTCGCCG CGCGCTGGAC CTTGGCGTCG ATGTGGTGGG CGGCATTCCG CATTTTGAGC GCACGATGGC CGACGGCGCG GCGTCGGTGA AGATGCTCTG CGAGGAAGCC GCCGAGCGCG GGTTGCGCGT GGACATGCAT TGCGACGAAA GCGACGACCC GATGTCGCGC CATATCGAGA CGCTGGCGAG CGAATCGGTA CGGCTGGGTT TGCAGGGACG CGTCACGGGT TCGCATCTGA CGTCGATGCA TTCGATGGAC AATTACTACG TCTCCAAGCT GCTGCCGCTG ATGCGAGAGG CCGGCGTATC GGCCATCGCC AATCCGCTGA TCAACATCAC GCTGCAGGGG CGGCACGATA CCTATCCGAA GCGGCGCGGC ATGACGCGCG TGCCCGAGAT GCTTGCCGCC GGCATTCCTG TGGCCTTCGG TCACGACTGT GTGATGGACC CCTGGTACAG CCTTGGCTCG GGCGACATGC TAGAGGTGGC CCACATGGGT CTGCACGTCG CGCAGATGAC GGGGCAGGAC GCCATGCGCG CGTGTTTCAC CGCTGTGACA GAAACGCCGG CACGTATCCT GGGTCTCGAA GGCTATGGGA TCTCGCCGGG CCGCCGCGCG GATCTGGTGC TGCTGCAGGC GCGGGACCCG GTGGAGGCGC TCCGCCTGCG CGCAACGCGG CTGCTGGTAA TGCGGGCAGG GAATGTCATC GCCCGCACGG CGCCGGCCAC CGCAATGCTG GCGCTCGCGG GTCGACCGGC TCAAGTCGAC TTCCAGTTAC ACCGGGCATG A
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Protein sequence | MFDTILRHCN MPDGRTDIDI GIANGRIAAV EPRIAATAGE EIDAAGQLVS PPFVDAHFHM DSTLSYGLPR VNQSGTLLEG IALWGELKPL LTQDAIVERA LAYCDWAVSK GLLAIRSHVD VCDPRLLATE ALLHVRERVR PYLDLQLVAF PQDGLLRAPD ALNNLRRALD LGVDVVGGIP HFERTMADGA ASVKMLCEEA AERGLRVDMH CDESDDPMSR HIETLASESV RLGLQGRVTG SHLTSMHSMD NYYVSKLLPL MREAGVSAIA NPLINITLQG RHDTYPKRRG MTRVPEMLAA GIPVAFGHDC VMDPWYSLGS GDMLEVAHMG LHVAQMTGQD AMRACFTAVT ETPARILGLE GYGISPGRRA DLVLLQARDP VEALRLRATR LLVMRAGNVI ARTAPATAML ALAGRPAQVD FQLHRA
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