Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4566 |
Symbol | |
ID | 4041425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1177514 |
End bp | 1178926 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637979985 |
Product | hypothetical protein |
Protein accession | YP_586697 |
Protein GI | 94313488 |
COG category | [S] Function unknown |
COG ID | [COG5361] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.348758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0184707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCAT CCATCCGCAG ATTGGCGGGC GCAGTTGCGC TTGCCGTTTT CCTTTCCGCT TGCTCGTCCA CGTCGGAGCG TTCGGTAGCC GATTCGGCCG TCGAACAGCC GCCATCCGAC CAAGCGATGA AAACCCTCTC GGCCGAGGTG TTCACCTACG CCTATCCGCT CGTCCTGATG GACGTTACGC GTGAGGTGGC GACGGCCAAG GTGCCGGTCA ATACATTCGG TCACAAGCGC GCCTTCCCGG ACGCGGCCTT TACCGACGTT GTCAGCCCGA ATGGCGACAC CTTGTATTCG TCGGCGTGGC TGGACCTGTC GAAGGAGCCG ATGGTGCTGT CCGTGCCCGA TACCAGCGGT CGCTATTACC TGATGCCGAT GCTTGATGCC TGGACCAATG TCTTCGCGTC GCCGGGCAAG CGCACGACTG GTACGAAGCG CGGGGTTTTC GCAATCGTCG GCCCGAACTG GCAGGGGCAG TTGCCCAAGG GTGTGAAGGA GATCCGGTCG CCCACCGATA TGGCCTGGCT GATTGGTCGG ATTCAGACCA ATGGCAAGCA GGACTATGCG AACGTGCACC GGCTGCAGGA TCAGTTCCGC CTGGTGCCGC TGTCGGCTTG GCGCAAGGGC AGCCGTACCG CAGTGCAGCC CGTGCCGCGC GCAGCGATGA TCGATACGGA GACGCCGCCG GCCGAGCAGG TGGCGGCGAT GGACGCCCAG GCATTCTTTA CCCGTCTGGC CGCGCTGCTG CCCGCCAACC CGCCCGCAGC CGATGACACC GCGATGGTCG AGAAGATGCA GCGCATGGGC ATCAAGGCCG GTCAGCCGTT CAAGACAACT GTGCTGGAGC CGTCGACGGC GCGCGCCGTG CAGGAGGGTG CATCCGCCGC GCTGACGATG ATCAAGGCCA ATGGGCGCAA GAGCGCTGCC GGCAATATGG GCTGGCGTGT CCAGCGCGAT ATCGGGGTAT ATGGCACGGA CTATGGCCGC CGCGCCGTGG TGGCGATGTT CGGTCTGGGC GCGAATCTGC CCGAGGATGC GATCTACCCG ACCGCGCGCG CCGATGCGAT GGGCCGCCCG TTCGATGGTG GCAGCCGCTA CGTCCTGCAC TTCGACAAGT CACAGTTGCC GCCGGTGAAA GCCTTCTGGT CGCTGACGAT GTACAACGAA AAGCAGGCAT TCGTTAGCAA CTCGATGCAG CGCTACGCGA TCGGCAGCCG TGATCGCCTG CGCTACAACC GCGATGGCTC TCTGGACATC TATATCCAGT ACGAACGGCC CGACGAGCGC AAGGTATCCA ACTGGCTGCC GGCGCCGCCC GACGCCTTCA ATCTGATGCT GCGAGCCTAC TGGCCGGACC AGGTGGTGCT CGATGGAAAG TGGATGCCGC CCGCCGTCCA GCGCGTGAAC TGA
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Protein sequence | MNSSIRRLAG AVALAVFLSA CSSTSERSVA DSAVEQPPSD QAMKTLSAEV FTYAYPLVLM DVTREVATAK VPVNTFGHKR AFPDAAFTDV VSPNGDTLYS SAWLDLSKEP MVLSVPDTSG RYYLMPMLDA WTNVFASPGK RTTGTKRGVF AIVGPNWQGQ LPKGVKEIRS PTDMAWLIGR IQTNGKQDYA NVHRLQDQFR LVPLSAWRKG SRTAVQPVPR AAMIDTETPP AEQVAAMDAQ AFFTRLAALL PANPPAADDT AMVEKMQRMG IKAGQPFKTT VLEPSTARAV QEGASAALTM IKANGRKSAA GNMGWRVQRD IGVYGTDYGR RAVVAMFGLG ANLPEDAIYP TARADAMGRP FDGGSRYVLH FDKSQLPPVK AFWSLTMYNE KQAFVSNSMQ RYAIGSRDRL RYNRDGSLDI YIQYERPDER KVSNWLPAPP DAFNLMLRAY WPDQVVLDGK WMPPAVQRVN
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