| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4525 |
|---|
| Symbol | |
|---|
| ID | 4041384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1129913 |
|---|
| End bp | 1130920 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637979947 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_586659 |
|---|
| Protein GI | 94313450 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0105502 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCG ATACCGCCGC ACTCGGCCGC TCGCCGGCCC AGCACAAGAC GCTTCCGTCC
AGCGCCACGC CCGGCGTCAA TGTCGATGCG GCATCGCTGG CCGCGCTTGA GGCTGCTGCG
CGGGACTTCC ATTTCCTGTC GCGCCAGCCC GTGCACAGCC TGCTGTCGGG GCGCCACGGG
TCACGCGTGC GGGGCCGTGG GCTGGCCTTC GAGGAATTGC GCCCCTACCT GCCCGGGGAC
GACGTTCGGA CGATGGACTG GCGCGTGACG GCGCGAACTG GCAAACCACA CGTACGGGTC
TATGCCGAGG AAAAGGAACG CCCGGCGCTG GTGGTGGTGG ATCAGCGCAT CAACATGTTC
TTCGGCAGCC GCCGTGCGAT GAAATCGGTG GCGGCGGCGG AAGTGGCCGC GCTGGCCACG
TGGCGAATGG TGGCAGAGGG GGACCGCGTG GGCGGTGTCG TCTTCGGCGA CAAGGAAGTG
ACCGCGCTGA CACCGCAGCG CAGCCAGCAC GGCGTGCTTC ACCTGCTTGG CGAATTGGCA
CGCCACAATC AGGCGCTGCG CGCGGACGCC CCGGCCAGCC AGGGCGCCAG CCAGTTGAAC
GCGGCGTTGC AACACGCGCT GCAACTGGCC CGTCACGACT ATCTGGTTAT CGTCATCAGC
GACTTCAGCG GCAACGATGC GCAGACCCGC GACCTGATGC TCGAACTGCG CCGTCGCAAC
GACATGTTGT CGGTGCTGGT CTATGACCCG TTCCTGCTGA ACCTACCCGA CTCCGGTCAC
CTCGTGGTCA GCGACGGCGA ACTGCAGGTG GAACTCGGCT TTGGCCGGGA GACGCTCCGG
AGTGCGATTC ACCGCTTCGC GGACGATCAC AATGCGGCGC TGGTCGAGTG GCACAACGGG
ATTGGCGTGC CGCTGCTCCC GGTATCGGCA GCTGAGGATA CGGCGCTGCA ACTGCGCCGG
CTGCTGGGAT ACCCTGCCGA TGCGTCGCCG CGGCGCGGCA GGGCATAG
|
|---|
| Protein sequence | MKPDTAALGR SPAQHKTLPS SATPGVNVDA ASLAALEAAA RDFHFLSRQP VHSLLSGRHG
SRVRGRGLAF EELRPYLPGD DVRTMDWRVT ARTGKPHVRV YAEEKERPAL VVVDQRINMF
FGSRRAMKSV AAAEVAALAT WRMVAEGDRV GGVVFGDKEV TALTPQRSQH GVLHLLGELA
RHNQALRADA PASQGASQLN AALQHALQLA RHDYLVIVIS DFSGNDAQTR DLMLELRRRN
DMLSVLVYDP FLLNLPDSGH LVVSDGELQV ELGFGRETLR SAIHRFADDH NAALVEWHNG
IGVPLLPVSA AEDTALQLRR LLGYPADASP RRGRA
|
|---|
| |