Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4516 |
Symbol | |
ID | 4041375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 1121351 |
End bp | 1121995 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637979938 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_586650 |
Protein GI | 94313441 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0463384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0270495 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGCG TGATCATTGC AGACGATCAC ACTGTGGTGC GCAACGGATT GCGCCATATC CTCGAACGCA CCAGCGACTT CGAGGTGGTT GGCGAAGCAG CCCGCGGTAC CGAAGTGCCA CAACTCGTGC GCGAGCTGTC GCCGCATGTC ATCCTGCTGG ACCTGTCGAT GCCCGGCCGG AACGGGCTGG AACTGATCCG GCAGCTGCGG ACCGATCATC CGGCACTACG AATCCTCGTG CTGACGATGC ACGCGGAGGA ACAGTATGTG GTCCGCGCCT TCCGTGCCGG CGCGGCTGGC TACCTGACCA AGGAAAGCGC GGCGACAGAA CTGGTGGAGG CGCTGAGGAA GGTGGCCGCG GGCGGCACCT ACGTCAGCCC CGCCATGGCC GAAAAGCTGG CGCTGGGCCT GCAGGAAAAG CCCGATGCGC CGCACGAGGG CCTGTCGGAT CGTGAACTCG AGGTCTTCCG GCGCATCGTC GACGGCGAGT CGCTCACGCA GATCGCCGCC GCGCTGTGCG TCAGCGCCAA GACGGTCAGC ACCTACAAGA TGCGCCTGAT GGAAAAACTC CAGCTTCGCA GCGACGCCGC GCTGGTCCGC TATGCGATCG AGGCGAGGCT GTTCGGCGAC GAAGACAAGC TATAG
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Protein sequence | MIRVIIADDH TVVRNGLRHI LERTSDFEVV GEAARGTEVP QLVRELSPHV ILLDLSMPGR NGLELIRQLR TDHPALRILV LTMHAEEQYV VRAFRAGAAG YLTKESAATE LVEALRKVAA GGTYVSPAMA EKLALGLQEK PDAPHEGLSD RELEVFRRIV DGESLTQIAA ALCVSAKTVS TYKMRLMEKL QLRSDAALVR YAIEARLFGD EDKL
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