Gene Rmet_4397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4397 
SymbolpotI 
ID4041255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp993762 
End bp994544 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID637979818 
Productbinding-protein-dependent transport systems inner membrane protein 
Protein accessionYP_586531 
Protein GI94313322 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.814917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.279187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCC CCCGTTGGCC TGTGTGGGTG GCCTGCCTGG GCTGCGCGGT CTATGCGTTC 
CTGTACCTGC CGTTGCTGAT CGTCGTGGCC TACTCGTTCA ATGACTCACG CCTGAACGCG
GAATGGGACG GCTTCACGCT GCACTGGTAT GACGTGCTGG CAAGCGATCC GGACATGCTG
GGTGCGGCGT GGAACTCGTT GATGATCGGC GCGATCGCGG CAGGCACGTC ATGCGTGCTC
GGCACGCTCG CCGCCATCGC GCTGCACCGC TACCGGCCGC CATTGCTGGC TACGCTGGTG
CTCGCGCCGA TCGCGATGCC CGAGGTACTG ATGGGGGTGT CGCTGCTGTT GTTCTTTGTT
GCCGTGAATA TCGATCTCGG CCTGACAGCC GTGGCGCTGT CGCATATCAC GTTCTGCGTG
GGCTTCGTTG CCGTGGTGGT GCGTGCCCGG CTCGAAGGGC TCGACGAGAG CCTGATCGAC
GCCGCCCGCG ATCTCGGCGC CTCACCGCTT CAGGCCGGGT GGCATGTCAT GCTGCCGCTG
ATGCTGCCGG GCGTCCTCGC GGGCGCGTTG CTGGCCTTCA CCCTGTCGAT GGACGACTTC
GTCGTGACCT TCTTCACGGC GGGGCCCGGC CAACCGACAC TGCCGCTGCA GATTTACTCG
ATGATCCGGA TCGCGGTCAC GCCGGAAGTG AATGCGATCT CGTCCATCCT CATGATGCTG
ACACTGGCCG TGTCGCTCAC GGCCTATCGC GTTTCGCGCG ACGTCTGGAG GGCGCAACTA
TGA
 
Protein sequence
MNRPRWPVWV ACLGCAVYAF LYLPLLIVVA YSFNDSRLNA EWDGFTLHWY DVLASDPDML 
GAAWNSLMIG AIAAGTSCVL GTLAAIALHR YRPPLLATLV LAPIAMPEVL MGVSLLLFFV
AVNIDLGLTA VALSHITFCV GFVAVVVRAR LEGLDESLID AARDLGASPL QAGWHVMLPL
MLPGVLAGAL LAFTLSMDDF VVTFFTAGPG QPTLPLQIYS MIRIAVTPEV NAISSILMML
TLAVSLTAYR VSRDVWRAQL