Gene Rmet_4380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4380 
Symbol 
ID4041238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp977534 
End bp978091 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content67% 
IMG OID637979801 
Producthypothetical protein 
Protein accessionYP_586514 
Protein GI94313305 
COG category[S] Function unknown 
COG ID[COG4648] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00449702 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.102332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATGGC GCAAATGGGG GCTGGGGCTG CTGACGATGG CTTACCCGCT CGTGATCTAC 
TTCGGCTTGC AGCACTACTC GCCGCGCGTG ATGGCGCTGG CGCTGGTCGT GCTCGCGCTG
CTGCGCGCCG CCACCAGCCG CCAGACCGGC TGGCGCGTCA CGGCGCTGCT GGCGGCCGCG
CTGGCAATTG CGGTGCTGGC CTCCGATCAT GAATTGCCGC TGAAGCTCTA CCCCGTCCTC
GTCAACGTGG CCATGCTCGC CGTCTTTGGC TGGAGCCTGC GCCATCCTCC CACGCTGATC
GAACGCCTTG CGCGCCTGCG CGAACCGGAC TTGCCGCCGA GCGGCGTGGC CTATACGCGC
CGGGTCACAC AGGCTTGGTG CGTGTTCTTC GTCGTCAATG GCACGATTGC CGCGATCACG
GCCCTGGCCG GTAGCGACCG TGCCTGGGCG ATCTACAACG GCGGCATTGC CTACGGATTG
ATCGGCGCGA TGTTCGCGGT GGAGTGGCTG GTGCGCCAGC GCGTGAAGCG CCGTCATGCG
GAGGGCCATC ATGGATGA
 
Protein sequence
MAWRKWGLGL LTMAYPLVIY FGLQHYSPRV MALALVVLAL LRAATSRQTG WRVTALLAAA 
LAIAVLASDH ELPLKLYPVL VNVAMLAVFG WSLRHPPTLI ERLARLREPD LPPSGVAYTR
RVTQAWCVFF VVNGTIAAIT ALAGSDRAWA IYNGGIAYGL IGAMFAVEWL VRQRVKRRHA
EGHHG