Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4380 |
Symbol | |
ID | 4041238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 977534 |
End bp | 978091 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637979801 |
Product | hypothetical protein |
Protein accession | YP_586514 |
Protein GI | 94313305 |
COG category | [S] Function unknown |
COG ID | [COG4648] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00449702 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.102332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATGGC GCAAATGGGG GCTGGGGCTG CTGACGATGG CTTACCCGCT CGTGATCTAC TTCGGCTTGC AGCACTACTC GCCGCGCGTG ATGGCGCTGG CGCTGGTCGT GCTCGCGCTG CTGCGCGCCG CCACCAGCCG CCAGACCGGC TGGCGCGTCA CGGCGCTGCT GGCGGCCGCG CTGGCAATTG CGGTGCTGGC CTCCGATCAT GAATTGCCGC TGAAGCTCTA CCCCGTCCTC GTCAACGTGG CCATGCTCGC CGTCTTTGGC TGGAGCCTGC GCCATCCTCC CACGCTGATC GAACGCCTTG CGCGCCTGCG CGAACCGGAC TTGCCGCCGA GCGGCGTGGC CTATACGCGC CGGGTCACAC AGGCTTGGTG CGTGTTCTTC GTCGTCAATG GCACGATTGC CGCGATCACG GCCCTGGCCG GTAGCGACCG TGCCTGGGCG ATCTACAACG GCGGCATTGC CTACGGATTG ATCGGCGCGA TGTTCGCGGT GGAGTGGCTG GTGCGCCAGC GCGTGAAGCG CCGTCATGCG GAGGGCCATC ATGGATGA
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Protein sequence | MAWRKWGLGL LTMAYPLVIY FGLQHYSPRV MALALVVLAL LRAATSRQTG WRVTALLAAA LAIAVLASDH ELPLKLYPVL VNVAMLAVFG WSLRHPPTLI ERLARLREPD LPPSGVAYTR RVTQAWCVFF VVNGTIAAIT ALAGSDRAWA IYNGGIAYGL IGAMFAVEWL VRQRVKRRHA EGHHG
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