| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4358 |
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| Symbol | sucD1 |
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| ID | 4041216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 953248 |
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| End bp | 954120 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979779 |
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| Product | succinyl-CoA synthetase, subunit alpha |
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| Protein accession | YP_586492 |
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| Protein GI | 94313283 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.122556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTGC TAATCGACCA ACATACGCGC GTGATCTGCC AGGGTTTCAC GGGCGCCCAA
GGCACCTTCC ACTCGGAGCA GGCATTGGCC TATGGCACGA AAATGGTTGG CGGTGTCACG
CCCGGCAAGG GCGGAGAGAC GCATCTGGGG CTGCCGGTAT TCGATACCGT ATCGGCCGCC
GCCCATGCCA CCGGCGCCGA TGCGTCGGTC ATCTACGTCC CGCCGCCGTT CGCCGCCGAT
GCGATCCTCG AGGCCGTGGA TGCCGGCATC GGACTGATCG TCTGCATCAC CGAAGGCATT
CCCGTCATTG ACATGGTGCG CGTCAAGCGG GCGCTGAGCG GCTCCGCCAG CCGGCTGGTC
GGGCCCAACT GCCCGGGCGT CATCACGCCT GGCCAGTGCA AGATCGGCAT CATGCCGGGG
CACATCCACA AGCCGGGACG GATCGGCGTG GTATCGCGCT CCGGCACGCT GACCTACGAA
GCGGTGGCGC AAACGACGGC AACGGGGCTT GGACAATCGA CCTGCATCGG CATTGGCGGA
GATCCCGTCA ACGGCACGAA CTTCATCGAC AGCCTGGAAC TGTTCCTTGC CGATGATCAG
ACCGAAGGCA TCATCATGAT CGGCGAGATC GGCGGGTCGG CCGAAGAGGA AGCCGCGCAA
TTCCTGCGCG ACGCGCGCAC TCGCAAACCC GTGGTCGGAT TCATCGCCGG CTCCACGGCC
CCACCGGGCC GCCGCATGGG CCATGCTGGC GCCATCATAT CGGGCGGCAC GGGCACGGCC
GAGGCCAAGA TCGAAGCGAT GCGCGAGGCG GGTATCCACG TGGCCGCGTC TCCAGCGGAG
CTGGGCAATA CGATGGCGGC GGCGATGCGG TAG
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| Protein sequence | MAVLIDQHTR VICQGFTGAQ GTFHSEQALA YGTKMVGGVT PGKGGETHLG LPVFDTVSAA
AHATGADASV IYVPPPFAAD AILEAVDAGI GLIVCITEGI PVIDMVRVKR ALSGSASRLV
GPNCPGVITP GQCKIGIMPG HIHKPGRIGV VSRSGTLTYE AVAQTTATGL GQSTCIGIGG
DPVNGTNFID SLELFLADDQ TEGIIMIGEI GGSAEEEAAQ FLRDARTRKP VVGFIAGSTA
PPGRRMGHAG AIISGGTGTA EAKIEAMREA GIHVAASPAE LGNTMAAAMR
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