| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4204 |
|---|
| Symbol | |
|---|
| ID | 4041062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 788735 |
|---|
| End bp | 789472 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637979627 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_586340 |
|---|
| Protein GI | 94313131 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.786164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTAC AACAAGCCTC GGCTGCAAAG CCTTCCATCC TGGTGGTCAG CGCCCACGCC
GCTGATTTTG TTTGGCGCGC GGGCGGTGCC ATCGCGCTTT ACGCCGAGCG CGGTTATCAC
GTGCGCATCG TGTGCCTGTC GTTCGGCGAG CGCGGCGAGT CCGCGAAGAT GTGGCGGCAG
CCGGGCATGA CGATGGACCG GGTCAAAGTC GCGCGTCGCG AGGAAGCCGA GCGCGCTGCC
GAGATCCTGG GCGGCACGCT CGAATGCTTC GATCTGGGCG ACTATCCGCT GCGCGTGCCC
GACGAGGCGC TGCTGCGGCT GGCCGACATC TATCGCGACA TTCGCCCGGA ACTGGTGCTG
ACGCACTCGC GTGAAGACAT CTATAACTTC GATCATCCAC TGGCCACTCA CGTGGCGCAG
GAAGCGCGCA TCATCGCCCA GGCGCATGGC TACAAGCCCG AGGTGCCGGT GATCGGCGCG
CCGCCTGTGT TCCTGTTCGA GCCGCACCAG CCGGAGCAGT GCAACTGGAA GCCGGACGTG
CTGCTCGATA TCTCCGCGGT CTGGGAGAAG AAGCAGCGCG CGTTCACGAC CATGGCCGCG
CAGGAACACC TGTGGGAGTA CTACACCCGC GTCGCGCTTC AGCGGGGCGC GCAGGCAACG
CGCAATTCCG ATCGCAAGAT TACCCATGGT GAGGGCTATG CCCGCATTTT CCCGCAAGTC
TCGGAGGTCC TGGCATGA
|
|---|
| Protein sequence | MSVQQASAAK PSILVVSAHA ADFVWRAGGA IALYAERGYH VRIVCLSFGE RGESAKMWRQ
PGMTMDRVKV ARREEAERAA EILGGTLECF DLGDYPLRVP DEALLRLADI YRDIRPELVL
THSREDIYNF DHPLATHVAQ EARIIAQAHG YKPEVPVIGA PPVFLFEPHQ PEQCNWKPDV
LLDISAVWEK KQRAFTTMAA QEHLWEYYTR VALQRGAQAT RNSDRKITHG EGYARIFPQV
SEVLA
|
|---|
| |