| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4189 |
|---|
| Symbol | |
|---|
| ID | 4041047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 772187 |
|---|
| End bp | 772963 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637979612 |
|---|
| Product | putative alpha/beta superfamily hydrolase |
|---|
| Protein accession | YP_586325 |
|---|
| Protein GI | 94313116 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCT GGATCTTCCT GCGCGGCCTG ACCCGTGAGT CACGCCATTG GGGCAACCTG
CCGGCGCTAT GGACATCGCG TGGGCTTGGG CAGCCGCTGC TGATCGACCT GCCCGGCAAC
GGCACGGCGC ACGACGCCAC GGTGCCGGCC AGCGTCGACG GCATGATGGA AGCGGTTCGG
GCTGCGGCGC GTGCATCGGG CGTGCCAGGA CCATGGCGCG TGCTGGCGAT GTCGCTCGGA
GCGATGGTGG CAACCCGATG GGTTCAGGCG TGGCCCGACG ATGTGGCGGG GCTGGTGCTG
ATCAATACGA GCATGAGGCC CTTCAGCGCG ATAACGGAGC GCCTGCAGCC GCTGAACTGG
CCGGCGCTGC TCGGCATGGC GAACCATTGG CAGGATCGCG TCCGCTGCGA ACGGACCGTG
CACCGACTGA CCTGCGAGCG GCTCGATACG CGCGACGCCG ACATCGCCGG CTGGGTCGAG
ATCGCACAAA GCGCGCCGGT CTCGCGCAAG GCGGCATGGC TGCAGTTGCT GGCCGCCGCA
CGATTTCGCG CCATGACCGC CGCGCCGGCA TGTCCAACGC TGATCCTCTC ATCCGATGCC
GACCGGCTGG TCAACCCGGC CTGCTCGGCG CACCTGGCGG CAGCGTGGCG CTCGGATGGC
GTCAGCCTTA TCCGTCATCC ATGGGCAGGA CACGACCTGC CGCACGACGA TCCACGCTGG
CTGTGCGACA CAGTGGCCGC CTGGAAGCAG GACAAAAAAA TACCGCCGGA CGGCTGA
|
|---|
| Protein sequence | MSAWIFLRGL TRESRHWGNL PALWTSRGLG QPLLIDLPGN GTAHDATVPA SVDGMMEAVR
AAARASGVPG PWRVLAMSLG AMVATRWVQA WPDDVAGLVL INTSMRPFSA ITERLQPLNW
PALLGMANHW QDRVRCERTV HRLTCERLDT RDADIAGWVE IAQSAPVSRK AAWLQLLAAA
RFRAMTAAPA CPTLILSSDA DRLVNPACSA HLAAAWRSDG VSLIRHPWAG HDLPHDDPRW
LCDTVAAWKQ DKKIPPDG
|
|---|
| |