Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4069 |
Symbol | |
ID | 4040927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 634644 |
End bp | 638024 |
Gene Length | 3381 bp |
Protein Length | 1126 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637979493 |
Product | acetyl-CoA carboxylase (biotin carboxylase and carboxyl transferase domains) / biotin carboxyl carrier protein |
Protein accession | YP_586206 |
Protein GI | 94312997 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism |
COG ID | [COG1038] Pyruvate carboxylase [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0299228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTTG ACGCACGCGC CTTACATTCT GGCTTGCATC CGGGCGGTAC TGCATCCATC CCTCACGGAA TCGAGCCAGT GAAAAAGCTT CTGATTGCCA ACCGCGGCGA AATCGCGCTG CGGGTTCAAC GCGCCGCGCA GGATCTCGGC ATTGCCACTG TCGCGGTGTA CGCCACCGAC GACGCTCAAT CGCGCCATCG CCAGCTTGCC GATGAAGCCA TCGCGCTGCC CGGCAATGGT CCGGCTACCT ATCTCGACAT CGACGCCATT CTCGGCGCGG CGCGCGCCGC TGGCTGCGAT GCAATCCATC CCGGCTACGG CTTCCTGAGC GAGCGTGCCG ACTTCGCGCA GGCATGCGCG GCAGCAGGTA TCACGTTCGT CGGCCCCACG CCCGAGCAGC TTGCCCTGTT CGGCGACAAG GGCCGCGCGC TCGAGCTGGC CGCGCAGTGC GATGTCCCGG TGATGCCGGC CACCCCCGGT GGCGCTTCGC TCGACGACGT CCGCGCATTC TTCGCGGCGC AGCAAGGCAA TGGCATCGTG CTGAAGGCCG TGGGCGGCGG CGGTGGGCGC GGGATGCGCG TCGTCCGCGA TGCCGAAGCG CTGGCCGAAG CCTACGCGCG CTGCCAGTCG GAGGCCCGCA GCGCCTTCGG CATCGAAGCG ATCTATGCCG AGCGACTGGT CGAACGCGCG CGCCATATTG AAGTACAGAT CATCGGCGAT GGGACTGAGA CAATCGCGCT CGGCGAACGC GATTGCACGC TACAGCGGCG CTTCCAGAAA CTGGTGGAAA TCGCGCCGAG CCCGGTGCTG ACACCCGCCC TGCGCGACCG CATCGTGCAG GCCGCCAGCA GGATCGCAAA GCACACCGGC TACCGCAGCC TGGGCACGTT CGAGTTCCTG GTGGAGACCG ACGACGCCGG CACGCCCCAC GGCTTCGTGT TCATCGAAGC CAATCCCCGT CTGCAGGTAG AGCACACCAT CACGGAACAG GTGACGGGTC TCGATCTCGT TGCCCTCCAG CTTGGCCTTG CTGATGGCCG GAGCCTGCGC GACCTGGGTC TCGACCCCGC CGCGCCGCCC ACGGCGCGCG GGTTCTCCGT TCAGCTACGC ATCAATGCCG AGGCCACCGA TGCGCAGGGC CAGGCGCGCC CGGCGCTCGG AAGGCTCGAA CGTTTCGATC CGCCCACCGG GCCCGATGTT CGCGTCGACA CGCACGGCTA TACCGGCTAC GCGCCGCCAG CTGGCTATGA CTCGCTGCTG GCCAAACTGA TCGTAAGCAC TTCTTCACCC CGTTTCGAGG ACGTGGTGCG GCGCGTGCGG CGTGCGCTCG GTGAATGCCG TGTTGACGGC GTGCCAAGCA ACCTCGACCT GCTGCGCGCC CTGGTGGCAC GCGAAGACTT CGCGACACAG CATGTCCATA CACGTCACTT CGAGGCGATC CTGCCGGAAC TGCTGACCGC CGCGCAACGC GTGGCGGCCA GTGACGCCGC GCGACAGGCT TCCATCGGCA TCGCGCAGAC CGCCCCCGTG CCTGTACCGA CCGCTACTGC CGAGGCCATC GACGAAGGAC TGGTTGCAGT GCGCGCGCCA ATGAACGGGC GCGTGGTCGA GATGCGCGTC CAGGAAGACG ACATCGTGCA ACCGGGCCAG ATCGTGGCGA TCCTCGACGC GATGAAGATG GAGCACACCA TCGCGGCCGA GTGCGCGGGG CGTGTGATCG ACGTGCGCGT CGGTGCCACC GGGCAGACTG TCGAAGGGCA AATCCTGCTC GTGCTGGAGC CGGTGGCTGA CGCCGGCGTC GCGCATCACC GCAGCGAGGC GGCAGACCCA CGCGCGATCC GCCCCGATCT GCAACGTGTG CGCGATCGCG ATGCGTTCCT CGATGATGCC GCGCGGCCGG ACGCGGTGGC GAAACGCCAT GCGCGCGGCC AGCGCACCGC GCGCGAGAAC GTGGCTGATC TGTGCGACGC AGGCAGTTTC GTCGAGTACG GCGCCTATGC GGTAGCCGCG CAGGCCAGCC GACGCAGCGC CGAGGACCTG ATCGCCAATA CGCCAGCCGA TGGCCTGATC ACCGGCACCG GCCGCATCAA CGGCACCCGA TTCGCACCGG AGCGCGCGCG CTGCGCAGTG CTGGCGTACG ACGCCACGGT GCTGGCGGGC ACGCAGGGCA AGCGCAATCA CATCAAGACA GATCGCATCC TGCAGGTGGC CGCCGAACAG AAGCTGCCAA CCGTGATCTT CGCGGAAGGC GGCGGCGGAC GCCCCGGCGA TGTGGACTTT CCTACCGTCG CTGGCCTCTA CCAACCGTCC TTCGCCGCAT TTGCCGCGCT GAGCGGCGAG GTGCCGGTGA TCGGCATCGC CGCTGGCCGG TGCTTCGCGG GCAACGCTGC CCTGCTCGGC TGCAGCGACG TGATCATCGC CACGCGCGAC GCGAACATCG GCATGGCCGG CCCCGCGATG ATCGAAGGCG GCGGCCTTGG CGTGTATCGC CCGGAGGACA TCGGCCCCGC CGCCGTGCAG TACCAGAATG GCGTGGTCGA CCTGCTTGTC GACGACGAAG CCGAGGCCGT GCGCGCCGCG AAGCATTACC TGTCGATGTT CCAGGGCCGC ACGCAGGACT GGGAGGCGCC CGACGCCCTG ATGCTGCGCG GCGTGGTGCC CGAGAACCGC CTGCGCGTCT ACGACACCCG TGCCGCGATC CAGGGCATTG CCGACGTCGG CAGCGTGATC GAGTTGCGCG CGGGCTATGG CACTGGCGTG CATACCGCGC TGGCGCGTAT CGAAGGCCGA CCCGTGGGCA TCGTCGCCAA CAACCCGCGT CACCTGGGTG GCGCCATCGA CGTGGACGGC GCGGACAAGG CCGCGCGATT CATGCAGCTG TGCGATACGC ATGGCCTGCC GATCGTCTCG CTGATCGACA CGCCGGGCTT TATGGTCGGC CCGGAGATCG AAGCCCGCGC GCAAGTCCGT CATGTGTCCC GATTGTTCGT GCTGGGCGCC AAGGTGCGCG TGCCGTTCAT GGCCGTGGTG CTGCGCAAGG GCTACGGCCT GGGTGCGATG GCCATGGCTG CAGGCGGCTT CCGCGCGCCG GCCTTCACCA TCTCCTGGCC AACCGGCGAG TTCGGCGGCA TGGGACTGGA AGGGGCGGTA CGTCTCGGCT TCCGCAAGGA GTTGGAAGCG CTGCCGGCTG GCCCCGAACG CGACGCCCTC TACCAGCAGC TCGTGGCGCA GATGTACGAA CGCGGACACG CAATCAATGC CGCAGCCGGG CTCGAGATCG ACGCGGTCAT CGATCCGGCC GAAACGCGGC GCTGGTTGCT GGCCGGCCTC GATGCCGCCC CACGAGACGA GGCGCCCCGA CGTTACGTGG ATGCGTGGTA G
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Protein sequence | MQLDARALHS GLHPGGTASI PHGIEPVKKL LIANRGEIAL RVQRAAQDLG IATVAVYATD DAQSRHRQLA DEAIALPGNG PATYLDIDAI LGAARAAGCD AIHPGYGFLS ERADFAQACA AAGITFVGPT PEQLALFGDK GRALELAAQC DVPVMPATPG GASLDDVRAF FAAQQGNGIV LKAVGGGGGR GMRVVRDAEA LAEAYARCQS EARSAFGIEA IYAERLVERA RHIEVQIIGD GTETIALGER DCTLQRRFQK LVEIAPSPVL TPALRDRIVQ AASRIAKHTG YRSLGTFEFL VETDDAGTPH GFVFIEANPR LQVEHTITEQ VTGLDLVALQ LGLADGRSLR DLGLDPAAPP TARGFSVQLR INAEATDAQG QARPALGRLE RFDPPTGPDV RVDTHGYTGY APPAGYDSLL AKLIVSTSSP RFEDVVRRVR RALGECRVDG VPSNLDLLRA LVAREDFATQ HVHTRHFEAI LPELLTAAQR VAASDAARQA SIGIAQTAPV PVPTATAEAI DEGLVAVRAP MNGRVVEMRV QEDDIVQPGQ IVAILDAMKM EHTIAAECAG RVIDVRVGAT GQTVEGQILL VLEPVADAGV AHHRSEAADP RAIRPDLQRV RDRDAFLDDA ARPDAVAKRH ARGQRTAREN VADLCDAGSF VEYGAYAVAA QASRRSAEDL IANTPADGLI TGTGRINGTR FAPERARCAV LAYDATVLAG TQGKRNHIKT DRILQVAAEQ KLPTVIFAEG GGGRPGDVDF PTVAGLYQPS FAAFAALSGE VPVIGIAAGR CFAGNAALLG CSDVIIATRD ANIGMAGPAM IEGGGLGVYR PEDIGPAAVQ YQNGVVDLLV DDEAEAVRAA KHYLSMFQGR TQDWEAPDAL MLRGVVPENR LRVYDTRAAI QGIADVGSVI ELRAGYGTGV HTALARIEGR PVGIVANNPR HLGGAIDVDG ADKAARFMQL CDTHGLPIVS LIDTPGFMVG PEIEARAQVR HVSRLFVLGA KVRVPFMAVV LRKGYGLGAM AMAAGGFRAP AFTISWPTGE FGGMGLEGAV RLGFRKELEA LPAGPERDAL YQQLVAQMYE RGHAINAAAG LEIDAVIDPA ETRRWLLAGL DAAPRDEAPR RYVDAW
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