Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4017 |
Symbol | pobR |
ID | 4040875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 587625 |
End bp | 588554 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637979441 |
Product | AraC family transcriptional regulator |
Protein accession | YP_586154 |
Protein GI | 94312945 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACCG TTCCGACCTA CTCGCTCTAT GGCGTGAATT CCTCGGAGCC CCTGCTGGAT CAGCTCCATT TCGAGTCCAT CGCCTCGCGC AGCCAGCTCT ACGCATGGGA GATCAAGCCA CACCGGCACG AACGCTTCCT TCAATTTCTG TACATCCATC GCGGCAGTGG GGAGGCCCTG CTGGAGGGCC GCAAGGAACG ACTTGCAAGC GGGTCGCTGA TCACGGTGCC ACCGCACCAC GTGCACGGTT TCGTGTTCGC GCCCGACGTC GACGGCATCA TCGTGACGAT GACCGACACC TACCTGCGCA CGTTGCTGGC CGGCTTGCCT GGGACGGTGC CGCTGTTCGA GCACCCACGG CATGACCGCG TGGCGCGACG CCACGCGCTG GCGGGCACGC TGGCGCTGTT CAGGGAGGAG ATGGAATCGG TATCGCCGTG GCGCGGCGCA TCGCTATCGG CGTTGCTGAC GCTGATGCTG GTGGGCATCG CGCGCATCGC CGAGGCGTCG GCCCCGGCGA AGACGCAGGC CGGCAGCCGG CCGGCCCGGC ACTTCCGGCA GTTCCAGCAA CTGTTGGAGA CCGACTATCG CGAACAGAAT GACATCGCGT ACTACGCCGG GGCGATCGGC GTCACCCCGA CGCAGCTCAA CCGCATCTGC CGCCAACTGG CCGGGCATAG CGCATTGCAG CTCATTCACG CACGCGTGCT GGCCGAAGCG CAGCGCGACC TGCTCTTCAG CGATCTCGAC ATCAAGCAGA TCGCGATGAC ACTCGGCTTC TCGGACGCAG GCTACTTCTC GCGCTTCTTC GCGCGGCTGA CCGGGCAGAC GCCCACCGCA TTCCGTGAAT CGGGCCGCGC CCGCCTGCCA GCGTTCGCAA TCAAGGACGC CTTGAACGCG ACAGATATGG CAGGCGCGGC GGACGCCTAA
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Protein sequence | MRTVPTYSLY GVNSSEPLLD QLHFESIASR SQLYAWEIKP HRHERFLQFL YIHRGSGEAL LEGRKERLAS GSLITVPPHH VHGFVFAPDV DGIIVTMTDT YLRTLLAGLP GTVPLFEHPR HDRVARRHAL AGTLALFREE MESVSPWRGA SLSALLTLML VGIARIAEAS APAKTQAGSR PARHFRQFQQ LLETDYREQN DIAYYAGAIG VTPTQLNRIC RQLAGHSALQ LIHARVLAEA QRDLLFSDLD IKQIAMTLGF SDAGYFSRFF ARLTGQTPTA FRESGRARLP AFAIKDALNA TDMAGAADA
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