| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3979 |
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| Symbol | livM4 |
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| ID | 4040837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 545391 |
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| End bp | 546419 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979403 |
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| Product | ABC transporter permease |
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| Protein accession | YP_586116 |
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| Protein GI | 94312907 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00212496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAATCAA TGCAAGGCAA AATCGGCTGG ACGCTGTTGT TCGTCGCGGC CATCGTGTTC
CCGCTGGCCG TCCCCAACAG CTACTACCTG ACGGTGATGA CGCTGGCCTT CATCATGGCC
ATCGCCACGC TTGGGCTGAA CCTGCTGACC GGATACACGG GCCAGCTCAA TCTCGCGCAT
GGCGGCTTCA TGGCCATCGG CGCCTACACG CTGGGCATCC TGACCGTCGA TCATCAGATG
CCGTACTGGC TCGCGTTCGC GTTGTCCGGC GTGGTCTGCA TGGTGCTGGG TTATGTCGTC
GGCACGGTGT CGCTGCGCCT GAAAGGGCAC TACTTCTCGA TCTTCACGAT GTGCGTAGGC
TACATCATCT ATCTGTTGAT CGAGAAATGG GAAAGCCTGA CCCATGGTGC GGTAGGCCTG
ATCGGCATCC CGGTCCCGGC TTCGATCGGT CCGATCGCCT TCGACAGCGT GCAGGCGCAG
TACTACCTGG TGCTGGTCTT CCTGGCCCTG GGCACGTTCG TCATGCATCG CATCGTCAGC
TCACTGGTCG GCCGCAGCTT CATGGCCGTG CGTAACAGCG ATGCTCTCGC GGAAGCGCTC
GGCATCAACC TGATGCGCAC CAAGGTCTTG TCGTTCGTGC TCTCCGTGGG CTACGCCGGA
TTCGCCGGCG CGCTCTATGC CGGCCAGGTA CGCTTCCTGG GTCCGGACAT CGCCCGCACC
GACATCACGT TCGACATGGT CATGGCGATG CTGGTCGGCG GCACGGGCAC GCTACTCGGT
CCGCTGCTTG GTTCGCTGCT GGTACCGTGG GTCACGCAGA CCCTGCAGTT CCTGCAGGAC
TACCGGATGC TCGTGTTCGG TCCGGTGCTG ATCCTGCTGA TCATCTTCGT GCCGGATGGC
ATCGTCGGTT CGTTCCTGAA GCGGCAAGTC CGCCGAGCCG CCGCCGCGCG CCGTGGGCAG
ATGGCCGCCC CGCGCCCGAC GCAAACCACG TCCGTCCCGA CCACCCGCCC CGGAGCCGAG
AATGCTTGA
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| Protein sequence | MKSMQGKIGW TLLFVAAIVF PLAVPNSYYL TVMTLAFIMA IATLGLNLLT GYTGQLNLAH
GGFMAIGAYT LGILTVDHQM PYWLAFALSG VVCMVLGYVV GTVSLRLKGH YFSIFTMCVG
YIIYLLIEKW ESLTHGAVGL IGIPVPASIG PIAFDSVQAQ YYLVLVFLAL GTFVMHRIVS
SLVGRSFMAV RNSDALAEAL GINLMRTKVL SFVLSVGYAG FAGALYAGQV RFLGPDIART
DITFDMVMAM LVGGTGTLLG PLLGSLLVPW VTQTLQFLQD YRMLVFGPVL ILLIIFVPDG
IVGSFLKRQV RRAAAARRGQ MAAPRPTQTT SVPTTRPGAE NA
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