Gene Rmet_3857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3857 
SymbolmetI 
ID4040551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp399309 
End bp399962 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content65% 
IMG OID637979276 
ProductDL-methionine transporter subunit 
Protein accessionYP_585994 
Protein GI94312785 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.955348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGCCAA TGGCTGAGAA GTACCTGAAG GCGCTGGGTG AGACCCTGAT CATGACGACC 
AGCGCGTGCG CGGTGGTGTT CGTCACTGGC CTCGCGCTGG CGCTCGTTCT GACGATCACC
GCGCCGGCGG GCCTGGCGCC ACGACCACGC GTGCATCGCA CGCTGTCGGT GCTGGTGAAC
ATGTTCCGGT CCGTGCCGTT CATCATCCTG CTGGTGGCGA TGCTTCCGGT CACGCGGATG
ATCGTCGGTA CCACGATGGG CATCTGGGCC GCCGTGGTGC CATTGAGCGC CCACCTGATT
CCGTTCTTCG CCCGCGTTTC ACAAGTGGCG CTCAATGAGA CTGATTCCGG GCTGGTCGAG
GCCGCGCGGG CCATGGGGTG CCGCCGCTGG CATATCGTGC GCCACGTGTT GCTGCCCGAG
GCGCTTCCTG CATTGATCGG CGGCGCCACT GTGACCGTGA TCGCGATGAT CGGCGCATCC
GCGATGGCGG GCGCAGTCGG TGCGGGCGGG CTGGGCGACC TTGCCATCCG CTATGGCTAC
GAACGGTATG AAACAGCGGT GATGTTCAAT GTGATCGTGA TCCTGGTGGC GCTGGTCACG
CTGGTGCAGT TCAGCGGAGA GCGGCTGGCA CGTCAGTTCG ACCATCGCAG GTAG
 
Protein sequence
MLPMAEKYLK ALGETLIMTT SACAVVFVTG LALALVLTIT APAGLAPRPR VHRTLSVLVN 
MFRSVPFIIL LVAMLPVTRM IVGTTMGIWA AVVPLSAHLI PFFARVSQVA LNETDSGLVE
AARAMGCRRW HIVRHVLLPE ALPALIGGAT VTVIAMIGAS AMAGAVGAGG LGDLAIRYGY
ERYETAVMFN VIVILVALVT LVQFSGERLA RQFDHRR