Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3852 |
Symbol | |
ID | 4040546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 394067 |
End bp | 395359 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637979271 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_585989 |
Protein GI | 94312780 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.332822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.575046 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGATC ACAGGCGGCT CAGGGTCCTG GTGTGCGGCG CATCGGGCCT GATTGGCGCC GTGCTGTGCA AACGTCTGGA AGCGCAGGGG CATGAGGTGA TTCGCGGTGT ACGCACGCCA ACGTCGGCTC GTGACGTCGC CATGGATTTC GGGACCGATA CCACCATCGA GCAATGGCTT CCGCGCGTGC AAGGCATGCA CGTCGTCATC AATGCCGTCG GCATCATCGT CGAAACCGGC ACGAATCGCT TCGAAGCCGT CCATCACCTG GCGCCGGCGG CGTTGTTCCG CGCCTGCGCC AAGGCCGGAG TGGGCCGCGT CATCCAGATC TCGGCGCTTG GCGCCGATCG CGGCGACACG CCCTACTTTC GCAGCAAGCG CGGTGCAGAC GACGTGCTGC GTGCTTTGCC CGTGCAGTGG CAGGTCCTCT ATCCATCGCT CGTGTATGCC CAGGACGGCG ACTCCGCCGC GATGTTTCGT ACCCTGGCGA GTCTTCCGGT GATACCGGTA CCCGAACTTG GCGATGCCAG GTTTCAACCG GTTCATATCG ACGATCTCGT GGATACCGTC GTCACTGTCA TCGTTCCGGC TATTCCCCCG GGCCAGTGCA TTGAGGTCGT CGGCGCAAGC CGCATGTCAT ATCGGGCGAT GCTGGACACC TATCGCCAGG GAATGCAGTT GCCAGCGCCA ATGTGGGCGA CCATTCCCGC CCCGTGCATG ACGGTGGCCG CGTATGTGGC GCGTTGCGTG CCGGGATCGA AGCTGACCCC CGACACGTGG CGGATGCTCC GGCGCGGGTG TCATGGCGAT GCCGCGCCGC TGACGCGCCT GCTCGGACAT CGGCCACGCG CCATTGGCAC TTTCATCGCA CCCGGTGAAG CCGATTGCCT GCGCCATCGC GCCGTTGGCG CATGGCGTAT GCCGATGCTG CGGATCGTGA TGGCCCTTGT CTGGTTGGCC ACGGCACTGG TCACGCTGTT CGCCTACCCG CTTGCCGACA GCCTGGCACT GCTCGGCGCA GTCGGATTGC ATGGCACGCC CGCCATCGTG ACGCTATATG CCGCGGTCTT CGTAGATGCG GCCATGGCCG TCGGATGCCT GCGCTATCCG TCACGCCGGC TATGGGCGCT TCAGGCTGCG CTTGTCGCCG GCTACTCGCT GATCATCGCC GTCGCATTGC CGCAGTTCCT CTGGCATCCG TTCGGGCCGG TGCTCAAGAA CCTGCCGATT CTCGCCATTC TCTTCATCCT CTACGCGGAG CAGGAATCAT GGAATACCTC GCCATCAAGG TGA
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Protein sequence | MADHRRLRVL VCGASGLIGA VLCKRLEAQG HEVIRGVRTP TSARDVAMDF GTDTTIEQWL PRVQGMHVVI NAVGIIVETG TNRFEAVHHL APAALFRACA KAGVGRVIQI SALGADRGDT PYFRSKRGAD DVLRALPVQW QVLYPSLVYA QDGDSAAMFR TLASLPVIPV PELGDARFQP VHIDDLVDTV VTVIVPAIPP GQCIEVVGAS RMSYRAMLDT YRQGMQLPAP MWATIPAPCM TVAAYVARCV PGSKLTPDTW RMLRRGCHGD AAPLTRLLGH RPRAIGTFIA PGEADCLRHR AVGAWRMPML RIVMALVWLA TALVTLFAYP LADSLALLGA VGLHGTPAIV TLYAAVFVDA AMAVGCLRYP SRRLWALQAA LVAGYSLIIA VALPQFLWHP FGPVLKNLPI LAILFILYAE QESWNTSPSR
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