Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3705 |
Symbol | ligJ |
ID | 4040676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 246580 |
End bp | 247605 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637979128 |
Product | 4-oxalomesaconate hydratase |
Protein accession | YP_585846 |
Protein GI | 94312637 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0366284 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATCG ATTGCCACGG GCACTTCACC ACCGCCCCCA AGGCCCTGGA AGACTGGCGC CAACGCCAGA TCGCCAGCCT GAACATCCCT GCGCTCGCGC CTTCCGTCAG TGAACTGCGC ATCAGTGATG ACGAACTACG TGACGCCATC GCCAGCAATC AGCTTCGCCT GATGCGCGAG CGTGGGATGG ACCTGACGAT CTTCTCGCCG CGCGCGTCGT TCATGGCGCA CCACATCGGC AGCTTCGAAA CCAGCGCCAC GTGGGCCGCC ATCTGCAACA CGCTCTGCCA CCGTGTCAGC GAGCTGTTCC CCGACCAGTT CGTCGGCGCC GCCATGCTGC CGCAATCGCC GGGAATCGAT ACCAAGAGCT GCGTCAAGGA ACTCGAACGT TGCGTGCTCG AGTACGGCTT TGTTGGCGTG AACCTGAATC CAGATCCGTC TGGCGGACAC TGGACATCGC CACCGCTATC CGATCCGTAC TGGTATCCGA TCTACGAGAA GCTCGTCGAA CTCGACGTGC CGGCCATGAT TCACGTCAGC ACGAGCTGCA ACGCGTGCTT CCACACCACT GGCGCGCACT ACCTGAACGC CGACACCACC GCATTCATGC AGGTGCTGAC CAGCGACCTG TTTCGGCGCT TTCCGACGCT GAAGTTCGTG ATTCCGCACG GTGGCGGCGC GGTGCCCTAC CACTGGGGCC GGTTCCGTGG GTTGGCGCAG GAGATGAAGC TGCCGCCGCT TGGCGAACAC CTGCTCAATA ACGTCTTCTT CGATACATGC GTCTATCACC AGCCTGGCAT CGACCTGCTG ACGCGCGTGA TACCGGTCAA GAACGTGCTG TTCGCCTCGG AGATGATCGG CGCGGTACGT GGCATCGACC CCGAGACCGG CCACTACTAC GACGATACGC GGCGCTACAT CGATCAGGCC GCGCTCTCTG ACGAGGAACG TCACCAGATT TACGAAGGCA ACGCGCGGCG CGTTTACAGC CGACTTGACG CGCGACTCAA GGCACGTGGC CACTAG
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Protein sequence | MIIDCHGHFT TAPKALEDWR QRQIASLNIP ALAPSVSELR ISDDELRDAI ASNQLRLMRE RGMDLTIFSP RASFMAHHIG SFETSATWAA ICNTLCHRVS ELFPDQFVGA AMLPQSPGID TKSCVKELER CVLEYGFVGV NLNPDPSGGH WTSPPLSDPY WYPIYEKLVE LDVPAMIHVS TSCNACFHTT GAHYLNADTT AFMQVLTSDL FRRFPTLKFV IPHGGGAVPY HWGRFRGLAQ EMKLPPLGEH LLNNVFFDTC VYHQPGIDLL TRVIPVKNVL FASEMIGAVR GIDPETGHYY DDTRRYIDQA ALSDEERHQI YEGNARRVYS RLDARLKARG H
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