Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3658 |
Symbol | tadC |
ID | 4040474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 193060 |
End bp | 194169 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637979081 |
Product | type II secretion system protein, transmembrane |
Protein accession | YP_585799 |
Protein GI | 94312590 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTGT TCACACTGAT CTCGATCAGC CTGCTTGTCG GCGCGGTGGC GATGATCCTG CTGGCGTGGC CGCTGATGCA GCAATGGCGG CAGCGGCGCG CCGCCGCGCG CACGATCGAC GAGGCGCTGG TGCGGCAGGC CACCCAGCGG GCCGCGGGTG CCGCCGCGCA GGCTGGCGCC ACGCAGGCCG GTGCCGCACC GGCGACGCAA CCGGCCCAGC AGATGTCGCC ACGCGCCGCA GCAGTAGCCG CCGCCACGGC AGCGGCCACG GCCGCGACGC AGGGTGCGAG CCCGGCGCCG GGTGTCGCCG ACACGCGGCG CGGATCGATC GGCGCGCAGC TTGGCGGGCG CATCAGCGAA CGCTTTAACC AGCACTGGCT CGAATCGCGC CTGGGCAAGG CCGCGGTGAG TGCCGAGGAG CAGCAGTTGC TGGAGCAGTG CGGTTTCTAC GGCGTCAGGC CACGCGCCGT ATTCGGTGCG TTGCGCCTGC TGGTGCCGGG CATCCTGGCG GCGCTGGCGT TCGCGTGGAA GCTCGACGTT TCGCTAGCCG GCGCCCTGGC GTGGGCGTTT GCAGCGTTCG CAGGCGGCTT CCTGCTGGCG AAGACCCTGT TGCGGCGGCG CGCGGCTCAA CGGCTGCGCA GCGTGGCCGA CGAGCTTCCG ATCCTGATCG ACATGCTGCG CCTGCTGCAG GGCGTGGGAT TGTCGATCGA CCAGAGCCTG CAAATCATCG TGACCGAGTT CGGCAGCATG CTGCAGGTGC TTGGCCCCGA GCTGCAGCGC TCCAACCAGC AGTTCGCGTC GGGCCGCTCG CGCGAGCAGA CGCTGCTGCG CATCGGCAAG CTGTTCGACG ATGAAGATCT GAAGGGCCTG ATCACCTTGC TGACGCAGGT GGACCGCCAC GGCGGCGCGG TACAGGAGCC GTTGCGCCAG TTCGGCGAGC GCCTGCAGAT CGCGCGCAAG GCGCGCATGA AGGACAAGAT CGGCAGGCTG ACGGTCAAGA TGACCGGTGT GATGGTGGTC AGCCTGCTGC CCGTGTTGCT GATCCTGACG GCAGGCCCGG GGTTCCTGGG TGTGATGCGC ATGTTGGCGC AGATGAATGG AGGCAGTTGA
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Protein sequence | MDVFTLISIS LLVGAVAMIL LAWPLMQQWR QRRAAARTID EALVRQATQR AAGAAAQAGA TQAGAAPATQ PAQQMSPRAA AVAAATAAAT AATQGASPAP GVADTRRGSI GAQLGGRISE RFNQHWLESR LGKAAVSAEE QQLLEQCGFY GVRPRAVFGA LRLLVPGILA ALAFAWKLDV SLAGALAWAF AAFAGGFLLA KTLLRRRAAQ RLRSVADELP ILIDMLRLLQ GVGLSIDQSL QIIVTEFGSM LQVLGPELQR SNQQFASGRS REQTLLRIGK LFDDEDLKGL ITLLTQVDRH GGAVQEPLRQ FGERLQIARK ARMKDKIGRL TVKMTGVMVV SLLPVLLILT AGPGFLGVMR MLAQMNGGS
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