Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3656 |
Symbol | tadA |
ID | 4040472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 190815 |
End bp | 192131 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637979079 |
Product | type II/IV secretion system protein, ATPase domain-containing protein |
Protein accession | YP_585797 |
Protein GI | 94312588 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG CGATCGAATT CTCGGACAAC GCTGCTGCCC CGTTTCCTGT TTCGCAGGAG TTCCACAATA TCAAGGAGGC CGCGCACGAA CACCTGCTGA CGCGCATCGA GGAGCTTGGC GCCGAGTTCG GGCGCTGGTC GCGCGCGGCC ATCCAGCGTT TTGTCGATCT GGAACTGGAG AGTTTCACGC GCCTGCGCCG CATTCCGATC AACGAGGCCG AGCTGCGCCA GATTTCCGAG GCGCTGACCA ACGAGCTGGC GGGCTTTGGG CCGATCGAGG ATCTGCTCAA CGATCCGGCG GTGGAAGATA TTCTCGTCAA CGGCCACATG GACGTCTACG TGTCACGCCA CGGCGTGCTG GAGCGGATTC CGGTGCGGTT TGCCGATGGC GGGCACTTGC TGCGCATCGT GCGGCGGATC CTGGCGCCGA TTGGCCGCCG CCTGGACGAA TCGAATCCGA TGGTCGATGC GCGCCTGCCA GACGGCGGCC GTATCAACGT GATCATCCCG CCGCTGGCGC TGGAAGGTCC GGTCGTCTCG ATCCGGAAAT TCCGCAAGGA TCCGCTGACG CCGCTCGATC TGCAGACACT CGGCACGATG AGCCCGGAGA TTACCGAGCT GCTTGACGCC GCCGTGCGCG CGCGCTGCAA CATCCTTGTG AGCGGTGGCA CCAGTTCAGG CAAGACGTCG CTGCTCAACG CACTGGCCAC CTTCATCCCG TCCACCGAGC GTGTGATTAC GATCGAGGAC ACGGCCGAAC TGGCGCTCAA TCACCCGCAC GTGGTCCGGC TGGAGAGCCG TCCCGGCGGC TTCGAAGGTA CCGGCACGGT GACGATCCGC GACCTGCTGC GCAACAGCCT GCGGATGCGT CCGGACCGCA TCATCGTGGG CGAAGTGCGC GGCGGCGAAG TGCTGGAAAT GCTGCAGGCG ATGAGCACGG GCCACGACGG CTCGATGGGC ACGATCCACG CCAGCAGCCC GCGCGAATGC CTGTACCGGC TGGAGATGCT GGCCGGGTTC GCGGGCTTCC AGGGCAGCGA AGTCAGCCTG CGCCGCCAGA TCGCCAATGC GATCGACTTC ATCGTGCAGA TCGGCCGGCT GTCGAATGGC CGGCGTCGCA TCCTGTCGAT CACGGAAGTG ACCGGACTGG GCGACAACAT CATTTCCACG CAGGAGCTTT ACCGGCACGA ACCGGTGCAG AACCCGGATG GCACTGAAAG CGACCGCTGG CAGTCGCTTG GCATCCTGCC GCATTCGCCC AAGCTGGCGC GGATGCGGCC GGCCAACTTC TCGCTGGATG ACCGCTTTGA TCTCTAG
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Protein sequence | MTDAIEFSDN AAAPFPVSQE FHNIKEAAHE HLLTRIEELG AEFGRWSRAA IQRFVDLELE SFTRLRRIPI NEAELRQISE ALTNELAGFG PIEDLLNDPA VEDILVNGHM DVYVSRHGVL ERIPVRFADG GHLLRIVRRI LAPIGRRLDE SNPMVDARLP DGGRINVIIP PLALEGPVVS IRKFRKDPLT PLDLQTLGTM SPEITELLDA AVRARCNILV SGGTSSGKTS LLNALATFIP STERVITIED TAELALNHPH VVRLESRPGG FEGTGTVTIR DLLRNSLRMR PDRIIVGEVR GGEVLEMLQA MSTGHDGSMG TIHASSPREC LYRLEMLAGF AGFQGSEVSL RRQIANAIDF IVQIGRLSNG RRRILSITEV TGLGDNIIST QELYRHEPVQ NPDGTESDRW QSLGILPHSP KLARMRPANF SLDDRFDL
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