| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3109 |
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| Symbol | |
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| ID | 4039938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 3368984 |
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| End bp | 3370249 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637978509 |
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| Product | type II secretion system protein |
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| Protein accession | YP_585250 |
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| Protein GI | 94312040 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.336893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGC GCGCACCAGC GGCGGGCGCT CGGACGGCAG CGCCGTCTCG GGCAAAATCA
GGGCGGAAGG CACCCACGCA GTACATCTTC GAGTGGGAAG CCAAGGACCG AAAAGGCAAG
TCGTTCAAGG GCGAACAACG CGCCGAGAGC CAGTCCGAGG TCACCGCCTC GCTGCGCAAG
CAGGGGCTGA CCGTCGTCAA GATGAAGAAG CGCAAGGGCG CGCGCGGCAA GAAGATTACC
GAGAAGGACA TCGCCTACTT CACGCGCCAG CTCTCGACCA TGCTCAAGGC GGGTGTGCCG
CTGCTGCAGT CGATCGACAT CATCGCGCGC GGCCACGCCA ACCCGAACTT CACCCAGCTG
CTCACTGTCA TCCGCTCGGA CATTGAATCG GGTAGCAGCA TGGCCACGGC GTTCCGCCGG
CATCCGCAGT ACTTCGATAC GCTCTACTGC AACCTGATTG ACGCTGGCGA ACAAGGCGGT
ATTCTCGATG CGCTGCTCGA GCGGCTGTCT CTCTATATGG AGAAAAGCAT CGCGCTGAAG
GGCCAGATCA AGTCCGCGAT GATCTACCCG ATCGCCGTGC TGACCGTGGC CTTTGCCGTG
ACGGTGATCC TGATGCTGTT CGTGATCCCG GCCTTCAAGG GCGTGTTCTC GAGCTTTGGC
GCCTCGCTGC CAGCGCCCAC GATGGTCGTG ATCAACATCT CCGACTTTTT CGTGCAGTAC
TGGTATCTCG TCATCGGCGC GCCAGTCTTC TCGATCATCG GCTATTTCCG CGCCCGCAAG
AAATCGGAGA AGGTGCAGCG CTGGCACGAC AAGGTTCTGC TCAAGCTGCC GATTTTCGGC
AGCCTGTTCC GCAAGGCGGT GGTCGCGCGC TGGACGCGCA CGCTGGCCAC GATGTTTGCG
GCAGGCACGC CGCTGGTGGA ATCGATGGAA TCGGTGGCAG GCGCCGCCGG CAACTGGATC
TACTACGACG CCACGCGCGA AATCGAGCAG TCTGTGCGTA TCGGTACCAG CCTGACCAAC
GCCATGCAGG CCACCCACGT GTTCGACAAC ATGGTGCTGC AGATGACCCA GATCGGTGAG
GAATCGGGCG CGCTGGACAG CATGTTGCTC AAGGTTGCCG AATTCTACGA GCGCGAGGTC
GACGACGCCG TGGCCGCCAT CTCGAGCCTG ATCGAGCCGC TGATCATCGT GGTGCTTGGC
GTGCTGATCG GCGGCATGGT CGTCGCCATG TATCTGCCGA TCTTCAAGCT GGGCCAAGTG
GTGTAA
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| Protein sequence | MATRAPAAGA RTAAPSRAKS GRKAPTQYIF EWEAKDRKGK SFKGEQRAES QSEVTASLRK
QGLTVVKMKK RKGARGKKIT EKDIAYFTRQ LSTMLKAGVP LLQSIDIIAR GHANPNFTQL
LTVIRSDIES GSSMATAFRR HPQYFDTLYC NLIDAGEQGG ILDALLERLS LYMEKSIALK
GQIKSAMIYP IAVLTVAFAV TVILMLFVIP AFKGVFSSFG ASLPAPTMVV INISDFFVQY
WYLVIGAPVF SIIGYFRARK KSEKVQRWHD KVLLKLPIFG SLFRKAVVAR WTRTLATMFA
AGTPLVESME SVAGAAGNWI YYDATREIEQ SVRIGTSLTN AMQATHVFDN MVLQMTQIGE
ESGALDSMLL KVAEFYEREV DDAVAAISSL IEPLIIVVLG VLIGGMVVAM YLPIFKLGQV
V
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