| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3011 |
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| Symbol | |
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| ID | 4039839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3267469 |
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| End bp | 3270498 |
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| Gene Length | 3030 bp |
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| Protein Length | 1009 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637978411 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_585153 |
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| Protein GI | 94311943 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR01297] cation diffusion facilitator family transporter |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0135257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTCCC GTCTGATTGA ATTTTCCCTG CGCCAACGTG CGCTGGTACT GCTTGGCGTG
CTGGCTTTGG CGGGTGCGGG CCTGGCGGCC TTCCTGCAAT TGCCGATCGA CGCCTATCCG
GATATTTCCC CCACGCAGGT CAAGCTGATT ATCAAGGCCC CTGGCATGAC GCCCGAGGAG
GTGGAGTCGC GCGTGATCAC GCCGCTGGAG ATGGAGTTGC TCGGTGTGCC GCGGGGCGTG
ATGCTGCGCT CCACGGCCAA GTACGCCATA GCCGACATCA CGCTGGACTT TGCCGAAGGC
AGCGACATCT ACTGGGCGCG TCAGCAGGTG GCTGAACGCT ATGCCGGCGT TTCGGGCAGC
CTGCCCGAAG GCGTCAGCGG CGGGCTGGCG CCGATTTCGA CACCGCTGTC GGACGTGTTC
ATGTTCACCA TCGAAGGCGG TGGCCTCACG TTGAGCGAGC GCCGCGCCCT ACTGGACTGG
ACGCTGCGCC CGGCCCTGCG CACGCTGCCC GGTGTTGCTG ATGTCAACGT GCTGGGTGGA
GAAGCCAAGA GCTTTGCTGT GGTGCCGGAT CGCGCACGGC TTTCCGCTGC GGGCCTCAGC
TTCTCTGATG TCATCACGGC GATCGGCCGC AACAACCGCA ATGACGGTGC GGGCCGCCTG
GATGCAGGCG AAGACACGCT GATCGTGCGC GCCGAAGGCG CGATCCACAC TTTGGACGAT
TTATCCCGTC TGATCCTGCG CGCGGGGGCC AATGGTACGG CCCCAGTTCG CCTGGGCGAC
GTGGCCCAGG TGCGCATCGA AGGCGTGACG CGATATGGCG CAGTCACCCG GGACGGCGCG
GGCGAAGCGG TGGAAGGCAT CGTGGTGGCG CTGCGCGGGG CCGATGCCTC GGCGCTGGTC
AAAGCCATTC GAGCCCGGCT GGACGAGGTG ACTCCCAGCC TGCCGCCCGG CGTCAAGGTG
GTGCCGTTCT ATGACCGCAG CACGCTGATC GAGCGCGCCG TGGGCACGGT GGAAAGCGCC
TTGCTGGAAG CGACGGTACT GGTCGTTATC CTGCTGCTTC TGTTCCTCGG CGAGCTTCGC
GCCGCGCTGG TTGTGGCGGT GATGGTGCCT TTGGCGGTAC TGGGCACCTT CTTGCTGATG
CGTCTGGTCG GCATGAGCGC CAACCTGATG AGCTTGGGGG GCCTCGCGAT CGCCATCGGC
ATGCTGGTGG ACGCTGCCGT AGTGGTGGTG GAAAACGCCG TCAGTCGGCT CGACCCGCAC
GCGCCCAGTG CGCACCAGCC GCGCCTGCAC CGCATATTCG CCGCGGCGCG CGAGGTCGCC
ATGCCTGTGG CCTCGGGCAT CCTCATCATC TGTCTGACCT TCATGCCCCT GCTCACTCTG
CAAGGGTTGG AAGGCAAACT GTTTGTGCCG GTGGCGCTGA CCATCGTATT CGCCCTGGGC
GTCTCGCTGC TGCTGTCGCT CACGCTGGTG CCGGTGCTGG CCTCGCTGCT GCTCAAGGAA
CACGCTCACA CCGAGCCGTG GGTGATGCGC TGGGCCACGC GCCTGTACCA ACCGCTGCTG
GAGGCTGCGC TTCACCACCC GCTACGCGCA TCGGCGGTCG CCATCGCGGC CCTGGCATTG
GGTGTGGTGG CCTACCTCGG CACGGGCAAG GCGTTCATGC CGACGATGGA CGAGGGCGAT
ATCCTGCTGC AACTGCAAAA GCCGCCGTCC ATCGGGTTGC AGCGCTCGCT GGAGATTGAC
CTGGCAGTGC AGAAGGCCAT CGGTGCGGCG GTGCCCGAGG TGCGGCACAG CATCGGGCGG
GTGGGCTCCG ACGAGCTGGG GCTCGACCCG ATGGGCCTGA ACGAAACCGA CCTGTTCATG
CAGCTCGCAC CGCGCAAGGA TTGGCATGCA GCCGACAAGG ACGCGTTGAG TGCCGAGATA
CGCAAGGTGA TGGATGCCTT CCCCGGCCTG GAATTCGGCT TTACCCAGCC CATCGAGATG
CGCATCTCGG AAATGCTCAC CGGCAGCCGG GGCGACGTGG CCGTCAAGCT ATTCGGCCCT
GATCTGCAAA CGCTGGGCGA TCTGGCGCAG CGCATGGCCG CTCGCATCGA GAAAGTGCCC
GGTGCGCGCG ACGTGCTCAC CCAGGCCAGC GACAGCGTGG AATACCTGCA GGTGAAGGTG
GATGCGCAGG CGGCGGGGCG CGCCGGACTG GCCGTGACGC AGGTTCAGGA CGAGCTGCGC
GCGCAGCTCG AAGGCGTGCC GGCCGGGTTG GTGATCGAGC CGGACAGGCG CACGCCCATC
GTGGTGCGCG GGGATGCCCG GCTGCGCGGA TCGGCCGAGC GGTTCAAGGA CTTGCAGCTC
GCCCGTGGCG ATCAGGGCGA AATCCCCTTG ACCTCGCTGG CGCGCATCGC CACCACTGAT
GGCCCCGTGC TGGTGCGGCG CGAGAACGGC TCGCGCTTCG CGCTGATCCA GTCCAGCGTG
AGTGGGCGCG ATCTGGTCGG CTTCGTGGAT GAAGCGCGCG CCGCCGTGGT GCGCGACGTG
CCGCTGCCGC CCGGCTACCG CGTCGAATGG GGTGGGCAGT TCGAGAACCA GCAACGCGCA
GCGGCCCGCC TTGGCATGGT GGTGCCGGTG GCCCTGGGAC TGATTTTCTT CGTGCTGTTC
ATGACCTTCG GCTCGGTGCG GCAGGCCGCG CTCATCCTCG GCAACGTGCC GTTTGCCATG
GTCGGCGGCG TGGCGGCGCT GTGGCTGTCG GGGCAGTACC TGTCGGTGCC TGCTTCGGTC
GTGTCATTTT CAGAAGACGA CTGCACCATT CAGCGCGGTT TGAAGCCTCT TGTGCATACG
GCTCCTGACA GCCAGATATC AGGACTCCTC TGCACGAAAC TCGTCTATGC TCAATACTCG
TGTGCACCAA AGCGAGATGA GCATGGCGAC CGATACCGCA CCGATTACCG AGCACGGCGT
GGCCACCCTG CCAGAACAGG CATGGGAGCG TGCGCGTCGT CGCGCGGAGA TCATTGGGCC
GTTGGCGCAG TCGGAGACGG TTGGGCATGA
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| Protein sequence | MLSRLIEFSL RQRALVLLGV LALAGAGLAA FLQLPIDAYP DISPTQVKLI IKAPGMTPEE
VESRVITPLE MELLGVPRGV MLRSTAKYAI ADITLDFAEG SDIYWARQQV AERYAGVSGS
LPEGVSGGLA PISTPLSDVF MFTIEGGGLT LSERRALLDW TLRPALRTLP GVADVNVLGG
EAKSFAVVPD RARLSAAGLS FSDVITAIGR NNRNDGAGRL DAGEDTLIVR AEGAIHTLDD
LSRLILRAGA NGTAPVRLGD VAQVRIEGVT RYGAVTRDGA GEAVEGIVVA LRGADASALV
KAIRARLDEV TPSLPPGVKV VPFYDRSTLI ERAVGTVESA LLEATVLVVI LLLLFLGELR
AALVVAVMVP LAVLGTFLLM RLVGMSANLM SLGGLAIAIG MLVDAAVVVV ENAVSRLDPH
APSAHQPRLH RIFAAAREVA MPVASGILII CLTFMPLLTL QGLEGKLFVP VALTIVFALG
VSLLLSLTLV PVLASLLLKE HAHTEPWVMR WATRLYQPLL EAALHHPLRA SAVAIAALAL
GVVAYLGTGK AFMPTMDEGD ILLQLQKPPS IGLQRSLEID LAVQKAIGAA VPEVRHSIGR
VGSDELGLDP MGLNETDLFM QLAPRKDWHA ADKDALSAEI RKVMDAFPGL EFGFTQPIEM
RISEMLTGSR GDVAVKLFGP DLQTLGDLAQ RMAARIEKVP GARDVLTQAS DSVEYLQVKV
DAQAAGRAGL AVTQVQDELR AQLEGVPAGL VIEPDRRTPI VVRGDARLRG SAERFKDLQL
ARGDQGEIPL TSLARIATTD GPVLVRRENG SRFALIQSSV SGRDLVGFVD EARAAVVRDV
PLPPGYRVEW GGQFENQQRA AARLGMVVPV ALGLIFFVLF MTFGSVRQAA LILGNVPFAM
VGGVAALWLS GQYLSVPASV VSFSEDDCTI QRGLKPLVHT APDSQISGLL CTKLVYAQYS
CAPKRDEHGD RYRTDYRARR GHPARTGMGA CASSRGDHWA VGAVGDGWA
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