Gene Rmet_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2600 
Symbol 
ID4039425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2828218 
End bp2828967 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content67% 
IMG OID637978000 
ProductIclR family transcriptional regulator 
Protein accessionYP_584746 
Protein GI94311536 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.248836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAGCT TTGTTCCTGC TGCCGCGCGC AGCCTTGCCG TCTTCGAGGT GTTCTCGCGC 
GAGAAGCGCG AGCTCTCCAA TTCGGAACTT GCGCGCCTGC TCGACCTGCC GGAGAGCAGT
TGCTCGGACC TGCTGCATAC GCTGACCGAG ACGGGGTACC TGATGCGTAC CGCGCGCACG
CGCCGCTTCT ATCCCACGAT GCGGCTCCAT TCGATCTGCG AGGCCATTGC GGGCAACGAT
CCGCTGGCCG CCGTGGCGGC CGAGGCCACG GAGTTCCTCA CTGGCAAGAC GGGCGAGACC
TCGCTATGCG GCCGGCTGGA TGGCGCCTAC GTGCGGGTGA CTGGCTTCCA GGAAAGTCGC
TACGAACTGC GTTACGTACT GCGCGTTGGC AAGCGCCTGG CCTTGCACGC CACGGCGCTC
GGCAAGGCGT TGCTGGCGGT GCTGCCGCCG GAAGACGCCG CGCGGCAGTT GCGCCTGCGC
GCGCTGCCCA AGCTGGGGCC GAAGACGGAA GTCAATCCGG TCGCGCTGGA AAAGCAGGTC
GCCGAAGTGC GCGAGCGCGG CTGGGCGTGG GTCGAGGACG AGGGAGGAGA AGGGGTGACG
GCCATCGCGG TGGCCGGGCG GATCGGCGAC GAGCCGTTCG CGATCTCGTT GGCGGGCCCC
ACCGAACGAT TCAATCGCCG CAAGGACGAG TACCTGGAGG TGATCGAGGC AGCGCGGGAT
CTGGTTTTCC CGACCGCCCA GAAGGATTAG
 
Protein sequence
MPSFVPAAAR SLAVFEVFSR EKRELSNSEL ARLLDLPESS CSDLLHTLTE TGYLMRTART 
RRFYPTMRLH SICEAIAGND PLAAVAAEAT EFLTGKTGET SLCGRLDGAY VRVTGFQESR
YELRYVLRVG KRLALHATAL GKALLAVLPP EDAARQLRLR ALPKLGPKTE VNPVALEKQV
AEVRERGWAW VEDEGGEGVT AIAVAGRIGD EPFAISLAGP TERFNRRKDE YLEVIEAARD
LVFPTAQKD