Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2600 |
Symbol | |
ID | 4039425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2828218 |
End bp | 2828967 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637978000 |
Product | IclR family transcriptional regulator |
Protein accession | YP_584746 |
Protein GI | 94311536 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.248836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTAGCT TTGTTCCTGC TGCCGCGCGC AGCCTTGCCG TCTTCGAGGT GTTCTCGCGC GAGAAGCGCG AGCTCTCCAA TTCGGAACTT GCGCGCCTGC TCGACCTGCC GGAGAGCAGT TGCTCGGACC TGCTGCATAC GCTGACCGAG ACGGGGTACC TGATGCGTAC CGCGCGCACG CGCCGCTTCT ATCCCACGAT GCGGCTCCAT TCGATCTGCG AGGCCATTGC GGGCAACGAT CCGCTGGCCG CCGTGGCGGC CGAGGCCACG GAGTTCCTCA CTGGCAAGAC GGGCGAGACC TCGCTATGCG GCCGGCTGGA TGGCGCCTAC GTGCGGGTGA CTGGCTTCCA GGAAAGTCGC TACGAACTGC GTTACGTACT GCGCGTTGGC AAGCGCCTGG CCTTGCACGC CACGGCGCTC GGCAAGGCGT TGCTGGCGGT GCTGCCGCCG GAAGACGCCG CGCGGCAGTT GCGCCTGCGC GCGCTGCCCA AGCTGGGGCC GAAGACGGAA GTCAATCCGG TCGCGCTGGA AAAGCAGGTC GCCGAAGTGC GCGAGCGCGG CTGGGCGTGG GTCGAGGACG AGGGAGGAGA AGGGGTGACG GCCATCGCGG TGGCCGGGCG GATCGGCGAC GAGCCGTTCG CGATCTCGTT GGCGGGCCCC ACCGAACGAT TCAATCGCCG CAAGGACGAG TACCTGGAGG TGATCGAGGC AGCGCGGGAT CTGGTTTTCC CGACCGCCCA GAAGGATTAG
|
Protein sequence | MPSFVPAAAR SLAVFEVFSR EKRELSNSEL ARLLDLPESS CSDLLHTLTE TGYLMRTART RRFYPTMRLH SICEAIAGND PLAAVAAEAT EFLTGKTGET SLCGRLDGAY VRVTGFQESR YELRYVLRVG KRLALHATAL GKALLAVLPP EDAARQLRLR ALPKLGPKTE VNPVALEKQV AEVRERGWAW VEDEGGEGVT AIAVAGRIGD EPFAISLAGP TERFNRRKDE YLEVIEAARD LVFPTAQKD
|
| |