Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2327 |
Symbol | |
ID | 4039147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2541444 |
End bp | 2542553 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637977723 |
Product | hypothetical protein |
Protein accession | YP_584473 |
Protein GI | 94311263 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000457837 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000027329 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCCTCA TGTTCCCGCG GCTCGCCCGC AATTTCGTCA AGAACGGATA TTTCCCGACC GACGAACCCA CGCTCGAAAG AGCGCTCAAC GCACTGATGC CCAGCGACGG GCCGATGTGC ATCCTCGATC CCTGCGCCGG CGAAGGCGTG GCGATCGCCG AAGCCGCCCA TGCCCTCGGG CGCGAGCAGG CAAAGGCGTT CGCCGTCGAG TTCGACGCGG AGCGGGCGCG CCATGCCCGC GGCCTGGTCG ATCACTGCCT GCACGCGGAC CTGATGGACA CGATGGTCTC CAAGCAGTCC TTCGGGCTGC TCTGGCTCAA CCCGCCGTAT GGGGACCTGT CCAAGGACGT CAACGGCAAC ATCGGCTATC AGGGCCAGGG CCGTGCCCGC CTTGAAAAGC TGTTCTACCA GCGCACGCTC TCGCTGCTGC AATACGGCGG CGTGCTGGTT TTCATCGTCC CCGGCTACGT GCTCGACGCG GAGTTGGTCG GCTGGCTGAC GCGCCACTAC ACGGACCTGC GCATCTACCG AGCGGTGGAG ACGCAGTTCA AGCAGGTGGT GATCTTCGGA CGCCGGGTGC GCCAGCGCGA GCAGGTGCCC GATGGCGTCA AGGCCGTGCG CAATCTGCTG TTGCAGGTAG GGCAAGGCGA AGTCGAAGCC GAGGAACTGC CGAGCGAGTG GCCGTTCCTG CCGTACATCG TCCCCGCCAG CCCGGCCGAG CCAGAGCATT TCTTCCGCGT GACGATGGAG CCCGAGCAGT TCGCCGATGA GGTTGGCAGG CTGCAAGGCT TGTGGCCATC GCAGGACACG CACCTGGGGG CTGCGCAGCA ATCGCTGCGT CCACCGGCGC GGGCCTTGTC CCGCTGGCAT CTCGCCCTGG CTCTGGCCGC GGGTGCGATC TCGGGGGTTG TGCGCTCCAA GACCGGGCGC GTGCTCGTCG TCAAAGGTGA CACCCACAAG GACAAGACGC TCCAGCGGGA GTTCACCGAA CGCGAAGACG GCTCCATCGC CGAGACCCGC ATCCTCACCG ACAAGTTCGT TCCCGTCATC CGCGCGTGGG ACATGACACC TGGCTCCGCG ACACGGGGCG AGGTGTTGAC CATTCGCTGA
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Protein sequence | MALMFPRLAR NFVKNGYFPT DEPTLERALN ALMPSDGPMC ILDPCAGEGV AIAEAAHALG REQAKAFAVE FDAERARHAR GLVDHCLHAD LMDTMVSKQS FGLLWLNPPY GDLSKDVNGN IGYQGQGRAR LEKLFYQRTL SLLQYGGVLV FIVPGYVLDA ELVGWLTRHY TDLRIYRAVE TQFKQVVIFG RRVRQREQVP DGVKAVRNLL LQVGQGEVEA EELPSEWPFL PYIVPASPAE PEHFFRVTME PEQFADEVGR LQGLWPSQDT HLGAAQQSLR PPARALSRWH LALALAAGAI SGVVRSKTGR VLVVKGDTHK DKTLQREFTE REDGSIAETR ILTDKFVPVI RAWDMTPGSA TRGEVLTIR
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