Gene Rmet_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2233 
Symbol 
ID4039051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2448183 
End bp2449283 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content65% 
IMG OID637977628 
ProductABC transporter-related protein 
Protein accessionYP_584381 
Protein GI94311171 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.150035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.188564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA TCGATCTCGA CCTCGCGCAC GCCTATGTCG CCAATCCTCA GAAGGATGAG 
GACTACGCGC TGCTGCCACT ACATTTCACG TTCGAGGATG GCGGTGCCTA CGCGCTGCTG
GGCCCGTCAG GCTGCGGCAA GACTACGTTG CTGAACTGCA TCTCGGGTCT GCTGCGTCCC
TCGCAAGGCA CGATCAGCTT CGATGGCAAG GATGTGACTG GCGATTCGCC GCAGGCACGC
AACATCGCCC AGGTATTCCA GTTCCCGGTG ATCTACGACA CGATGACGGT CGGCGAGAAC
CTCGCGTTCC CACTGCGCAA CCGCGGTGTA CCGGCCGCGC AGGTCAAGGA GCGGGTTGGG
CGCGTGGCCG AAATGCTCGA CCTCTCGGCG TCGCTGGACC GCCGCGCCAG CGGGCTGGCT
GCCGACGCCA AGCAGAAGAT TTCGCTGGGT CGTGGTCTGG TGCGGCAGGA CGTATCGGCG
ATCCTGTTCG ACGAGCCGCT GACCGTGATT GACCCACACT TGAAATGGCA ACTCCGTCGC
AAGCTCAAGG AGATCCACCA CGAGTTTCGC CTGACGCTGA TCTACGTGAC CCATGACCAG
ACCGAGGCAC TGACCTTTGC CGATCAGGTT GTGGTCATGT CGCGTGGCAA GGCCGTGCAG
GTGGGCTCGG CCGATGCATT GTTCGAGCGG CCCGCGCACA CCTTCGTGGG GCACTTCATC
GGCTCGCCCG GCATGAATTT CCTGCCGGGC CAATGGCGCG ATGGTGGCAT CGAAATGGCG
GGGCGGCGCT ACGCGCCCGA CCTGTCGCCA GATGTGGCAG CGAGGCTGCA GGCTGCCGGC
AGCTTCAAGG TCGGCGTGCG TCCGGAGTAC CTGAAGCTGG CAGCCGGCAA CGATCCGCAG
GCGCTGCCCG TGCGCGTGGA GCGCGCGCAG GATATCGGCA CGTACTGGCT GGTGTCCTCA
ACGGTAGACC ACGGCGAAGC CGCGACCCTG CGCGCGCGGC TGGGAACCGA GGCCGCGCAT
CTGCGCGCTG GCGATACCGC GTGGTTGTCG GTGTTCAACC GGCATACCTG CTTCTACGTC
AACGAGGAAC TGGTCCAATG A
 
Protein sequence
MARIDLDLAH AYVANPQKDE DYALLPLHFT FEDGGAYALL GPSGCGKTTL LNCISGLLRP 
SQGTISFDGK DVTGDSPQAR NIAQVFQFPV IYDTMTVGEN LAFPLRNRGV PAAQVKERVG
RVAEMLDLSA SLDRRASGLA ADAKQKISLG RGLVRQDVSA ILFDEPLTVI DPHLKWQLRR
KLKEIHHEFR LTLIYVTHDQ TEALTFADQV VVMSRGKAVQ VGSADALFER PAHTFVGHFI
GSPGMNFLPG QWRDGGIEMA GRRYAPDLSP DVAARLQAAG SFKVGVRPEY LKLAAGNDPQ
ALPVRVERAQ DIGTYWLVSS TVDHGEAATL RARLGTEAAH LRAGDTAWLS VFNRHTCFYV
NEELVQ