Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2233 |
Symbol | |
ID | 4039051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2448183 |
End bp | 2449283 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637977628 |
Product | ABC transporter-related protein |
Protein accession | YP_584381 |
Protein GI | 94311171 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.150035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.188564 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCA TCGATCTCGA CCTCGCGCAC GCCTATGTCG CCAATCCTCA GAAGGATGAG GACTACGCGC TGCTGCCACT ACATTTCACG TTCGAGGATG GCGGTGCCTA CGCGCTGCTG GGCCCGTCAG GCTGCGGCAA GACTACGTTG CTGAACTGCA TCTCGGGTCT GCTGCGTCCC TCGCAAGGCA CGATCAGCTT CGATGGCAAG GATGTGACTG GCGATTCGCC GCAGGCACGC AACATCGCCC AGGTATTCCA GTTCCCGGTG ATCTACGACA CGATGACGGT CGGCGAGAAC CTCGCGTTCC CACTGCGCAA CCGCGGTGTA CCGGCCGCGC AGGTCAAGGA GCGGGTTGGG CGCGTGGCCG AAATGCTCGA CCTCTCGGCG TCGCTGGACC GCCGCGCCAG CGGGCTGGCT GCCGACGCCA AGCAGAAGAT TTCGCTGGGT CGTGGTCTGG TGCGGCAGGA CGTATCGGCG ATCCTGTTCG ACGAGCCGCT GACCGTGATT GACCCACACT TGAAATGGCA ACTCCGTCGC AAGCTCAAGG AGATCCACCA CGAGTTTCGC CTGACGCTGA TCTACGTGAC CCATGACCAG ACCGAGGCAC TGACCTTTGC CGATCAGGTT GTGGTCATGT CGCGTGGCAA GGCCGTGCAG GTGGGCTCGG CCGATGCATT GTTCGAGCGG CCCGCGCACA CCTTCGTGGG GCACTTCATC GGCTCGCCCG GCATGAATTT CCTGCCGGGC CAATGGCGCG ATGGTGGCAT CGAAATGGCG GGGCGGCGCT ACGCGCCCGA CCTGTCGCCA GATGTGGCAG CGAGGCTGCA GGCTGCCGGC AGCTTCAAGG TCGGCGTGCG TCCGGAGTAC CTGAAGCTGG CAGCCGGCAA CGATCCGCAG GCGCTGCCCG TGCGCGTGGA GCGCGCGCAG GATATCGGCA CGTACTGGCT GGTGTCCTCA ACGGTAGACC ACGGCGAAGC CGCGACCCTG CGCGCGCGGC TGGGAACCGA GGCCGCGCAT CTGCGCGCTG GCGATACCGC GTGGTTGTCG GTGTTCAACC GGCATACCTG CTTCTACGTC AACGAGGAAC TGGTCCAATG A
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Protein sequence | MARIDLDLAH AYVANPQKDE DYALLPLHFT FEDGGAYALL GPSGCGKTTL LNCISGLLRP SQGTISFDGK DVTGDSPQAR NIAQVFQFPV IYDTMTVGEN LAFPLRNRGV PAAQVKERVG RVAEMLDLSA SLDRRASGLA ADAKQKISLG RGLVRQDVSA ILFDEPLTVI DPHLKWQLRR KLKEIHHEFR LTLIYVTHDQ TEALTFADQV VVMSRGKAVQ VGSADALFER PAHTFVGHFI GSPGMNFLPG QWRDGGIEMA GRRYAPDLSP DVAARLQAAG SFKVGVRPEY LKLAAGNDPQ ALPVRVERAQ DIGTYWLVSS TVDHGEAATL RARLGTEAAH LRAGDTAWLS VFNRHTCFYV NEELVQ
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