Gene Rmet_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2035 
Symbol 
ID4038842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2203917 
End bp2204825 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content64% 
IMG OID637977420 
Productcondensin subunit ScpB 
Protein accessionYP_584183 
Protein GI94310973 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.401895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCC AAGAGGCGAA GATCGTCCTC GAGACCGCGC TGATCTGTGC GCAGGAGCCG 
TTGCGCGTTG GTGATCTGCG ACGGTTGTTC GCCGACGACG TCGGTGCCGA CACCATCCGG
GTTCTACTCG AAGAGCTGCG CAACGACTGG CAGCAGCGCG GGGTGGAGCT CGTGGCCCTG
GCCAGCGGTT GGCGGTTCCA GAGCCGTCCC GAGATGCGCG AGTTTCTTGA CCGACTCAAT
CCGGAAAAGC CGCCGAAGTA CTCGCGTGCC GTGATGGAAA CGCTAGCGAT CATCGCGTAT
CGCCAGCCGG TGACGCGCGG TGACATCGAA GAGATCCGGG GCGTGACGGT CAGCACGGAA
GTGGTCAAGA AGCTTGAGGA TCGGGACTGG ATCGAAGTCA TCGGTCACCG GGACGTGCCT
GGCCGCCCCG CGTTGTACGC AACGACCAAG GCATTCCTGG ATGACCTCGG TCTGCGCTCG
CTGGATGAGT TACCGCCGCT CGAGGATGCC CAGGCCCAGG CCCAGGCGGC ACTGCTGGAT
CAGCAGGCCA TCGATTTCGA GGCGGTCGCG ACGGCGAATC CGCCTGCTGG TGACGAGGAA
GCCTTTTCGG AGGCTACCGT TGGGGTGGCT GAGACGGGCG AGCCGGCAGT TGAGTCGTTG
TCGGTCGAGC CGCAATCCGA AGATCTGTCC GGTGGCGCGA GCGATGCCGC CGGCAATGAA
AACGAACAGA ACGACAGCGT CGCGCAGTTG CCCGAGGGTG ATGGGCATGA CGATGACGCG
CCGGTGGCCC AGGCCAACGG ATTCCATGTG GACACAGAGT CTTCCTCGCA GGAGGACGCC
GCAGTTCCGG CTCGCGACGG TGATATGCCG CTGACGACCG AGGACGACGA CGAGCGCGTG
TCCAACTGA
 
Protein sequence
MNTQEAKIVL ETALICAQEP LRVGDLRRLF ADDVGADTIR VLLEELRNDW QQRGVELVAL 
ASGWRFQSRP EMREFLDRLN PEKPPKYSRA VMETLAIIAY RQPVTRGDIE EIRGVTVSTE
VVKKLEDRDW IEVIGHRDVP GRPALYATTK AFLDDLGLRS LDELPPLEDA QAQAQAALLD
QQAIDFEAVA TANPPAGDEE AFSEATVGVA ETGEPAVESL SVEPQSEDLS GGASDAAGNE
NEQNDSVAQL PEGDGHDDDA PVAQANGFHV DTESSSQEDA AVPARDGDMP LTTEDDDERV
SN