| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1646 |
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| Symbol | |
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| ID | 4038449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1780504 |
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| End bp | 1782177 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637977030 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_583798 |
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| Protein GI | 94310588 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.010516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATGA TGGATTCACT GATACCACGG GGAGTGAAGC GAAGCAGCGG CGGCAGGGTG
CCCGTCGCGC TATGGATCGC GCTGCTGTGG TGGCTGACCA TGCCTTTCGC CACGTGGGCT
GCCGAGGCGT CCACGTCACC TGCGGCGCCG CCCGCTGATC TGGTGCTGAT GAACCTGCCG
GTGGTGACGC TACGCGCGGA ACTTGGTGGC ACGCCACCCG CGGTGCGGGT CGCCCGCGCG
CAGGAGCGGT TCGACAAGCT TGACCGGCGC GAGCTCGGCG AACCCGTGAC CCAATTGCCG
GGCCGACTGG GCAACGTGTC CGGCGTGGCA GTGCAGGTCG GTAACCGCAT CCTGTTTTCG
GTCGTCGATG GCGACCTGGA CCCCGAACAG CCAGGGCAGA CCGTGGAGTC CGTGGCTGCC
ACGGCCGCCG CGCAACTCCA GACTGCGCTC GATGCCCGCC GCGACCAGTT GCACTGGCCC
ACCATACTGC GTGGCACAAG CTACTCGCTG GCTGCGTTGC TGCTCCTGCT CGGCCTGTTG
TGGTCCATCG CGCGCGGCCG TCGTCGCCTC GATCTGATGC TCCGCCGCGC GCTGGAATCA
CGCTTGCGCA CACGGACGTC GGGTCGTTTC GACTGGTCCG GCGCGCTGCT GCAGCTTGCC
AACAGCATCG CGCAGATCGT CGGCGCGGCG CTGATCGCGC TACTCATCTT CCTGTGGCTC
GATTTCGCGC TCGAACAGTT CCCGCTGACC CGGCCGCTGG GCCAGCGCAT GGGGGCGTTC
CTGCTCGGCC TGCTGGGGCA TGTCGGCACG TCCATGCTAG ACGCCGTCCC GGGGCTGGTG
ACCGTGGCGG TCATCCTGCT TATCACACGT GCCGTGCACA AGCTGGTAGC CGCGATCTTT
ATTGCGGTGC AGCGGGGCCA GGTCACGGTG CCCGGCATGC ACCCGGAAAC CGCCGGCGCT
ACGCGGCGCA TCGCGTCGAC CGTGGTCTGG GCGCTGGGGC TGACGTTTGC ATACCCGTAC
ATTCCGGGCT CGCAGAGCGA TGTATTCAAG GGCCTTTCGG TGCTGTTCGG GTTCATGGTG
ACGCTGGGAT CGGCAAATAT CGTCAACCAG ATCATGAGCG GCATGGTGCT GGTGTATTCA
CGCGCGCTCC GGCGCGGCGA CATGGTCGAT ATCGGCGGCA CGATCGGCAC AGTGACGTCA
CTGGATTCGC TGTCGGTCAA GATCGTCAAC GTGCGGCGAG AGGAAGTGAC GCTGCCGAAC
GCGGTGGTGG TCGGCAGCGC GATTCACAAT TACTCTCGCC GGGGTGGTTC GGAAGCGAAT
GTGGGCGCGC TGGTCTCCAC GTCGGTCACC ATCGGCTATG ACGCGCCATG GCGCCAGATT
CACGGCATGT TGATCCGCGC GGCCGCCACC GTGCCGGGGC TTGGCAACAA TCCGCCCCCT
TACGTGCTTC AGCGTGGTCT GCAGGACTTC TACGTCGAAT ACGAACTGTT TTGCTCGATT
GACGACCCAC GGCGGCGCTT CGAGCTTCTA TCGGTCCTGC ACGCGGCGAT CCAGGACGAA
TTCAACCGCA ACGGGGTACA GATCATGTCC CCGCACTACA TGGACCAGCC CGTCGCTCCG
GTGGTGGTAT CGCCAGACAA TCAGTACGCG GCGCCAGGCG CGGAGAAGAC GTAG
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| Protein sequence | MEMMDSLIPR GVKRSSGGRV PVALWIALLW WLTMPFATWA AEASTSPAAP PADLVLMNLP
VVTLRAELGG TPPAVRVARA QERFDKLDRR ELGEPVTQLP GRLGNVSGVA VQVGNRILFS
VVDGDLDPEQ PGQTVESVAA TAAAQLQTAL DARRDQLHWP TILRGTSYSL AALLLLLGLL
WSIARGRRRL DLMLRRALES RLRTRTSGRF DWSGALLQLA NSIAQIVGAA LIALLIFLWL
DFALEQFPLT RPLGQRMGAF LLGLLGHVGT SMLDAVPGLV TVAVILLITR AVHKLVAAIF
IAVQRGQVTV PGMHPETAGA TRRIASTVVW ALGLTFAYPY IPGSQSDVFK GLSVLFGFMV
TLGSANIVNQ IMSGMVLVYS RALRRGDMVD IGGTIGTVTS LDSLSVKIVN VRREEVTLPN
AVVVGSAIHN YSRRGGSEAN VGALVSTSVT IGYDAPWRQI HGMLIRAAAT VPGLGNNPPP
YVLQRGLQDF YVEYELFCSI DDPRRRFELL SVLHAAIQDE FNRNGVQIMS PHYMDQPVAP
VVVSPDNQYA APGAEKT
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