Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1465 |
Symbol | |
ID | 4038268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1585594 |
End bp | 1586850 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637976849 |
Product | phage integrase |
Protein accession | YP_583617 |
Protein GI | 94310407 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0137829 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.595385 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACCG ACACAGCACT GCGCAATCTG AAGCCTAAGT CATTGACTTA TAAGGTTTCT GACCGGGACG GGATGTACGT GACGGTATCG CCCGCAAATA CCGTCACCTT CCGCTACGAC TACCGTCTCA ACGGCCGCCG CGAGACCTTG ACCATCGGCC GCTACGGTGC AGGCGGCATT TCGCTGGCAA TGGCGCGTGA ACTGCTTCTG GAGGCGCGCA AGGCCGTTCT CCAGGGCATA TCGCCCGCGC TGGAGAAGCA ACGCGACAAG CGCCGGGTTC GCGCCATCAA GACCTTCGGC GCGGCGATGG AGACGTATCT TGCCCACACG AGATGGGCCG ACAGCACCCG CGCCGTGCGC AAGCACATCA TCGACCGGGA CATCCTGCCG GTTTTCCAGA ATCGGCTGCT GACCGAGATC CAGGCCGAAG ACCTTCGGAT TCTGTGCAAC AAGGTCAAGG AGCGCGGGGC ACCAGCCACC GCGGTGCAGA TCCGGGACAT CGTGAAGCAG GTCTACGTCT ACGCCATCGC CCACGGTGAG AAGGTGGTCA ACCCCGCCGA CAGCGTGGGG CCGTCCTCGA TCGCCACCTT CGTGCCGAAG GATCGTGCCC TCTCGCCGCT GGAAATCCGT TTGATGGTGC AGCAGTTGGA GACGGTGGCG ACCTATCCGA CCATCAAGCT GGCGCTGCGC CTGATCCTGC TGACGCTGGT GCGCAAGAGC GAACTGATCC AGGCCACTTG GGATGAAGTC GATTTCGAGC GCAAGACCTG GACGATTCCG AAGCAGCGGA TGAAGGGTCG CAATCCGCAC GTGGTCTATC TGTCGCGCCA GGCGCTCGAC ATCTTCGTGA CGCTGCACGC CTGTGCGGCT GGCTCAAAGT TCGTTTTCCC TTCTCGCTAC GATGCAGAGC GGTGCATGTC CAATGCGACC TTGAATCGCA TCACGATGCT GGTGGCAGAA GGTGCCAAGG CCAAAGATCT GCCGCTACAG CCGTTCACCG TCCACGATCT GCGCCGCACC GGCTCGACGC TGCTGAACGA AATCGGCTTC AACCGCGACT GGATTGAGAA GTGCCTGGCG CACGAGGAGG GGCGTTCCTC GCGTTCGGTC TACAACAAGG CCGAATACGC CGAGCAGCGG CGCCACATGC TGCAAGAGTG GGCCAACCTG GTCGATGCCT GGGGTGGCGG ACAGACTTAC GTGCCGAAGC TGATGCCGGA GAACGTGGTC GTGCCGGCGT TGAGCGCGAT CGCGTAG
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Protein sequence | MLTDTALRNL KPKSLTYKVS DRDGMYVTVS PANTVTFRYD YRLNGRRETL TIGRYGAGGI SLAMARELLL EARKAVLQGI SPALEKQRDK RRVRAIKTFG AAMETYLAHT RWADSTRAVR KHIIDRDILP VFQNRLLTEI QAEDLRILCN KVKERGAPAT AVQIRDIVKQ VYVYAIAHGE KVVNPADSVG PSSIATFVPK DRALSPLEIR LMVQQLETVA TYPTIKLALR LILLTLVRKS ELIQATWDEV DFERKTWTIP KQRMKGRNPH VVYLSRQALD IFVTLHACAA GSKFVFPSRY DAERCMSNAT LNRITMLVAE GAKAKDLPLQ PFTVHDLRRT GSTLLNEIGF NRDWIEKCLA HEEGRSSRSV YNKAEYAEQR RHMLQEWANL VDAWGGGQTY VPKLMPENVV VPALSAIA
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