| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1437 |
|---|
| Symbol | pyrH |
|---|
| ID | 4038240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1558348 |
|---|
| End bp | 1559124 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637976821 |
|---|
| Product | uridylate kinase |
|---|
| Protein accession | YP_583589 |
|---|
| Protein GI | 94310379 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0528] Uridylate kinase |
|---|
| TIGRFAM ID | [TIGR02075] uridylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.439884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000435544 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGTG CCGCCCGCGC CCACCCTCCG TTCAAACGAG CGATCAAGAA CCAGCCCGAG
GTGAACATGC CTGCCTATAA GCGCGTCCTT CTGAAATTGT CCGGTGAAGC CCTGATGGGC
GACGATGCCT TCGGTATCAA CCGTGCCACC ATCGAGGGCA TGGTCAATGA CATTGCCGAA
ATCGTGAAGC TGGGTGTCCA GGTCGCGGTC GTCATCGGCG GCGGTAATAT CTTCCGCGGT
GTCGCTGGCG GTGCTGCCGG CATGGACCGC GCCACGGCCG ATTACATGGG TATGCTGGCC
ACGATGATGA ATGCGCTGGC CTTGCAGGAC GCGATGCGCC ACGCCAGCAT CGAAGGCCGT
GTGCAGTCCG CGCTGCGCAT GGACCAGGTC GTCGAGCCGT ATATCCGCCC GCGCGCGATT
CGCCAGCTCG AAGAGGGCAA GGTGGTGATC TTCGCCGCCG GCACCGGCAA CCCGTTCTTC
ACGACCGATA CGGCCGCGGC GCTGCGTGGC TCTGAAATCG GTGCCGAAAT CGTGCTCAAG
GCGACCAAGG TGGACGGCGT GTATACCGCC GATCCCAAGA AGGATCCGAG CGCCACGCGC
TACACGACCA TCTCGTTCGA CGAAGCCATT TCCCGCAACC TGCAGGTCAT GGACGCCACC
GCGTTCGCGC TGTGCCGTGA CCAGAAGCTG CCAATCAAGG TGTTTTCGAT CGTCAAGCCG
GGCGCACTGA AGCGCGTGAT CCTGGGCGAG GATGAGGGCA CGCTGGTGCA CGTTTAA
|
|---|
| Protein sequence | MLRAARAHPP FKRAIKNQPE VNMPAYKRVL LKLSGEALMG DDAFGINRAT IEGMVNDIAE
IVKLGVQVAV VIGGGNIFRG VAGGAAGMDR ATADYMGMLA TMMNALALQD AMRHASIEGR
VQSALRMDQV VEPYIRPRAI RQLEEGKVVI FAAGTGNPFF TTDTAAALRG SEIGAEIVLK
ATKVDGVYTA DPKKDPSATR YTTISFDEAI SRNLQVMDAT AFALCRDQKL PIKVFSIVKP
GALKRVILGE DEGTLVHV
|
|---|
| |