| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1345 |
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| Symbol | |
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| ID | 4038148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1454926 |
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| End bp | 1455663 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637976729 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_583497 |
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| Protein GI | 94310287 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.457105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC GTGCGCTTTC CATTTCTCTC GCCGCCGCGC TGTCGGTATC GCTGCTGGCC
GTACAACCGG CATCTGCCAT CACGGTGTTC GATCCGTCCA ACTTCGTGCA GAACACGCTG
ACCGCGATTC GCACGCTGGA GCAGATCAAC AACCAGATCC AGCAGCTTCA GAACGAAGCG
CAGATGCTGA TGAACCAGGC GCGCAACCTC GCCAGCCTGC CGTCCAGCGT GGTGAACCAG
TTGCGCGCCA ATCTGGCGAC GACCGAGCGG CTGATCGCTC AGGCTCGCGG CTTGGCCTAC
GACGTGACGA ACCTCGATCG GGAGTTCGCG CGCCTGTATC CCGAGCAGTA CGCCGCCACC
GTCAGCGGCG ACCAGATGTA CCGCGACGCG CAGGAGCGTT GGCGGAACAC GCTCAACGGC
TTGCAGACCA CCATGCAGAT GCAGGCGCAG GTGTCGCAGA ACCTGGGCGA AGACGAAAGC
GTGCTGGCCG ACCTTGTGAG CAAGAGCCAG TCGGCCCACG GTGCATTGCA GGCCATGCAG
GCCATGAATC AGTTGCTCGC CTTGCAGGCC AAGCAATCGA TACAGGCGCA ACGGCTCCAG
ATCACACAAG ACCGGGCCGC CTCGCTGGAG CTGGCGCGAC AGGCGGCGGC CACGGAACGT
GCCCGCGAAG TGCGGCGGCG CTTCCTGGGC GAAGGCACGC CGTACACGCC GCAGACCGTG
AACTTCTACC GCGACTGA
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| Protein sequence | MKIRALSISL AAALSVSLLA VQPASAITVF DPSNFVQNTL TAIRTLEQIN NQIQQLQNEA
QMLMNQARNL ASLPSSVVNQ LRANLATTER LIAQARGLAY DVTNLDREFA RLYPEQYAAT
VSGDQMYRDA QERWRNTLNG LQTTMQMQAQ VSQNLGEDES VLADLVSKSQ SAHGALQAMQ
AMNQLLALQA KQSIQAQRLQ ITQDRAASLE LARQAAATER AREVRRRFLG EGTPYTPQTV
NFYRD
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