Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1241 |
Symbol | |
ID | 4038044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1364828 |
End bp | 1365838 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637976628 |
Product | phage integrase |
Protein accession | YP_583396 |
Protein GI | 94310186 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.097797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGACT TCAACCTTCC GTCGATCATT CACCGCTACT TTCTGGAGTA TTTGCCTCGG CACAAGGGGC TGCAATCGAG CTCAATCCGC AGCTATCGGG ATAGCCTGCG CCTGTTCCTG ATCTTTGTGG CGGGCACACA CCGGCTCGGC GTCAGCGAAC TGGTATTGGA GCACCTTGAT TATCCCGCCG TGCAGGCGTT TCTGCACAGC ATGGAGGCCG ATCGAGGCAA CGCCATCAGT ACCCGCAACC AGCGCTTGGC GGCACTTCAT GTGTTCTACG AATACGTGGG CCGGACCGTT CCAGAGATGT TGCCTACCAG TGCCAAGGTC GCTGCCATCC CGATGAAGCG TTGCCCACGG CCGGAGATGA CGTTCCTTGG ACGTGACGAG GTTCAAGCCA TGTTCGCCTG CATTCCTGCT CAGCATCGCC TCTCATCACG GGATCGGGCG CTGCTTATGC TGCTCTACAA CACCGGCGCG CGTGTTTCAG AGGTCGCGCA TCTGAAGGTC GAACAACTCG ACCTGCGCTC ACCTGCGCGC GTCAGGCTAT TGGGCAAGGG GTCGAAGTGG CGCACGTGCC CACTCTGGAA CCAGACGGCC AAGGCGCTGC AGGCGATGCT GGATGAGCGC GGAACGAACT TGCCTCCCGA ATCGCCGGTA TTCGTTGGAG CTTCGCAGGC GCCGATGACC CGGTTCGGTA TTTACAAGCG CATCCGCCAC TATGCCACGC TCTGGGAAGC ATCGGGGCAC ACAGCTTCCG CAGCCAAGGT AACGCCTCAC GTATTTCGAC ACACCACAGC GGTTCATCTA CTTGAGTCGG GCGTGGAGGT CAATGTCATC CGAGGCTGGC TGGGACATGT CAATCTGGAG ACGACCAATC GCTATGCGGA AATCACCATT CGCATGAAGG CCGAAGCCCT GAAGTTGTGC GATCCGATCG TCGCAGGTGT TCCACGCAAA CCCGCCTGGA AAGACGATGC TGCGATGATG GCCTGGCTGT CGTCCCTCTG A
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Protein sequence | MKDFNLPSII HRYFLEYLPR HKGLQSSSIR SYRDSLRLFL IFVAGTHRLG VSELVLEHLD YPAVQAFLHS MEADRGNAIS TRNQRLAALH VFYEYVGRTV PEMLPTSAKV AAIPMKRCPR PEMTFLGRDE VQAMFACIPA QHRLSSRDRA LLMLLYNTGA RVSEVAHLKV EQLDLRSPAR VRLLGKGSKW RTCPLWNQTA KALQAMLDER GTNLPPESPV FVGASQAPMT RFGIYKRIRH YATLWEASGH TASAAKVTPH VFRHTTAVHL LESGVEVNVI RGWLGHVNLE TTNRYAEITI RMKAEALKLC DPIVAGVPRK PAWKDDAAMM AWLSSL
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