Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1227 |
Symbol | |
ID | 4038030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1347374 |
End bp | 1348240 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637976614 |
Product | inner-membrane translocator |
Protein accession | YP_583382 |
Protein GI | 94310172 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0358415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0652986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTTG TCTCGTTTCT GATCCAGTGC CTGAACAGCG TGCAGTACGG GCTGCTGCTG TTCCTCGTGG CCAGCGGCTT GACGCTGATC TTCGGCATCA TGGGCGTGAT CAATCTCGCA CATGGCAGCT TCTACATGCT GGGGGCCTAT CTGGCATTCA CGCTGGCCAG CCTGACGGGC AACCTGTTCA TTGCGCTGCC GCTCGGCATC GTGCTGGCCG TGCTGTTCGG GTACGTGCTG GAGTGGGCCT TCTTCAGCTA CCTGTATCAG CGTGACCACC TGCAACAGGT GCTGATGACA TACGGGCTAA TCCTGGTCTT CGAGGAGTTG CGCAGCATCC TGGTGGGCGA CGACGTGCAC GGTGTGCAAG TGCCGTCGCT GCTAGACTGG TCGCTGCCGG TGGGCAACGA CATGACCTAT CCGGTGTATC GCCTGTTCAT CTCCGCCGTC TGCCTGTTGG TGGCCGGCGC GATGTACTAC GTGATTCGCC GCACGCGTGT GGGCATGATG ATCCGCGCCG GCGCCACGAA CCGCGAGATG GTGCAGTCGC TTGGCGTCAA CGTGACCGTG CTCTATCGTT TCGTGTTCGC GCTCGGCGTG GCCCTGGCCG TGCTGGCAGG CATGATCGCC GCGCCGGTTT CCTCGGTCTA CCCGGGCATG GGCGGGCAGG TGCTGATCAT CTGCTTTGTC GTGGTCGTGA TCGGCGGTAT CGGCTCGGTC AAGGGTGCGC TGGTGGCGTC GCTGCTGATC GGCTTCGTCG ATACGTTCGG CAAGGTGTTC TGGCAGGATG CGGCTGGCGT GCTGGTCTAC CTGCTGATGG CCGTGATCCT GCTGTGGAAG CCCCAGGGGC TGTTCCGCGC GGGCTGA
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Protein sequence | MDLVSFLIQC LNSVQYGLLL FLVASGLTLI FGIMGVINLA HGSFYMLGAY LAFTLASLTG NLFIALPLGI VLAVLFGYVL EWAFFSYLYQ RDHLQQVLMT YGLILVFEEL RSILVGDDVH GVQVPSLLDW SLPVGNDMTY PVYRLFISAV CLLVAGAMYY VIRRTRVGMM IRAGATNREM VQSLGVNVTV LYRFVFALGV ALAVLAGMIA APVSSVYPGM GGQVLIICFV VVVIGGIGSV KGALVASLLI GFVDTFGKVF WQDAAGVLVY LLMAVILLWK PQGLFRAG
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